Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1923 |
Symbol | |
ID | 4604173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2350836 |
End bp | 2352359 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639781300 |
Product | SpoVR family protein |
Protein accession | YP_927798 |
Protein GI | 119775058 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000604699 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAC GCACACCTTT AAGCGACGGA CCGGATTGGA CCTTTGAACT GTTGGAAGAG TACCAACGGG AAATTGAGCG GGTTGCAGCG CACTATCGGC TCAACACTTA CCCAAATCAA ATTGAGGTTA TCACTGCCGA GCAGATGATG GATGCCTATG CTGGCATCGG TATGCCCATA GGCTACACCC ACTGGTCTTT TGGCAAACGT TTTATTCAAA CAGAACAAAG CTACAAGCGA GGCCAAATGG GGCTCGCCTA TGAAATTGTT ATCAATTCCA ATCCCTGCAT CGCCTATTTG ATGGAAGAAA ACACCATCAC CATGCAGGCA TTGGTGATGG CCCATGCTTG CTACGGCCAC AACAGCTTTT TCAAAGGCAA TTACCTGTTC AAAACCTGGA CCGATGCCAG CTCAATTATC GACTATCTGG TCTTTGCCAA AAATTACATT GCAGAATGCG AACAGCGCCA CGGTGTCGAT GCCGTGGAAA ATGTAATCGA TTCCTGTCAT GCCCTAATGA ACTATGGTGT TGACCGCTAC AAACGCCCGT CCGAAATATC ATTCCGCGAA GAAAAAGCCC GCCAGAAAGA GCGTGAGGAA TACCTGCAAA GTCAGGTGAA TGACCTTTGG CGCACCATTC CGGTCAGCCA GGTCGAAAAA GTCCAGCCCA AAAAACGTTT TCCTGCTGAG CCTCAGGAGA ACATTCTCTA TTTCATTGAG AAGCACGCAC CACTGCTTGA ACCATGGCAA AGGGAAATCG TACGCATTGT CCGCAAGATG GGGCAGTATT TTTATCCCCA GAAGCAAACC CAGGTGATGA ACGAGGGCTG GGCCACCTTC TGGCACTACA CCATTTTGAA TCACCTCTAT GATGAAGGTC TGGTGACCGA CCGTTTTATG CTGGAATTCC TGCAAAGCCA CACGGGTGTG GTCGCACAAC CCGCTTACAA CAGTCGCTAT TATTCCGGCA TTAACCCCTA CGCCCTCGGA TTCAATATGT TCACCGATAT CCGCCGGATC TGTGAAAACC CCACAGAGGA AGACAGAGCC TGGTTCCCTG AAATTGCCGG CAGCAATTGG CTCGATACCC TGCACTTTGC CATGGAAAAC TTTAAAGACG AGAGTTTTAT CAGCCAATAT CTGTCGCCGG CCATGATAAG ACAGTTCAAG CTTTTCGGGA TTGTGGACGA CGAGCGAAAA AACTATCTGT CTATTTCAGC TATCCATGAT GAGGTCGGCT ATCGGGAAAT TCGGCAAACC ATGTCACAGC AATACAACCT CTCCAATCTT GAACCCAACA TTCAGGTGCA CAGGGTTGAG GTAATGGGCG ATCGCTCCAT GACATTAAGG TATGTTCCTT TCAACAATAT TCCACTGGCA GACGATTACA GGGAAGTGCT GAAACACCTT CATCGATTGT GGGGTTTCAC CGTGGTGCTT GAACAGGAAG AAAGTGATGG CACCATCAAG GAGCTGGCAC GCTGCCCCCC ACGAGATGAA GAGGGACACT CGGTGAAAAT ATAA
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Protein sequence | MGKRTPLSDG PDWTFELLEE YQREIERVAA HYRLNTYPNQ IEVITAEQMM DAYAGIGMPI GYTHWSFGKR FIQTEQSYKR GQMGLAYEIV INSNPCIAYL MEENTITMQA LVMAHACYGH NSFFKGNYLF KTWTDASSII DYLVFAKNYI AECEQRHGVD AVENVIDSCH ALMNYGVDRY KRPSEISFRE EKARQKEREE YLQSQVNDLW RTIPVSQVEK VQPKKRFPAE PQENILYFIE KHAPLLEPWQ REIVRIVRKM GQYFYPQKQT QVMNEGWATF WHYTILNHLY DEGLVTDRFM LEFLQSHTGV VAQPAYNSRY YSGINPYALG FNMFTDIRRI CENPTEEDRA WFPEIAGSNW LDTLHFAMEN FKDESFISQY LSPAMIRQFK LFGIVDDERK NYLSISAIHD EVGYREIRQT MSQQYNLSNL EPNIQVHRVE VMGDRSMTLR YVPFNNIPLA DDYREVLKHL HRLWGFTVVL EQEESDGTIK ELARCPPRDE EGHSVKI
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