| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1899 |
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| Symbol | |
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| ID | 4604149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2316415 |
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| End bp | 2318484 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781276 |
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| Product | transglutaminase family protein |
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| Protein accession | YP_927774 |
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| Protein GI | 119775034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.642436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGAC CTTCCACCAA ACACCACGCA GAAATTATCG GCCGCAGTAC ACTCTTTTGG
TTGCTGCTGA CTCACTTTGC GCTCATAGCT CCCCTCGCCG AAAAATCGAC CCCATGGACC
CTCGCCATCA GCGCCATCTG CCTGGTTTGG CGGGTTGGGA TTTTCTATGG CAGGGTCGCG
CGGCCACCGC GGCTCTTGGT AACAGGGCTC GGCATTGCCT CTGCTATCAC ACTGGCCTTG
GTTGGCAAAC AGATAGGTCT TCTCAACGCC TTGATGAACC TGCTAATCCT CGGCTACTCA
TTGAAAACCA TTGAAATGTT GGGTAAGCGA GATGTGCGCA CTGTCATTCT GGTGGGGTAT
TTCCTGATTG CCATCAACCT CATTGATAAT CAGGGAATAG GTGCCATGGC ACTGGCCTTG
ACGCTGTTCT GGCTTAATAC CCAATCGCTG CTGTCTCTTT ATCGCGATCC TGGGAGCAAA
CGCGATGCCC TGGCCGTAAA ACTGGTATTG CAAAGCCTGC CATTGGCCAT ACTGCTATTT
TTAGTGTTGC CAAGACTGCC ACCACTTTGG ATGGTACCCA GCCTCAAGAG CAGTATCACG
GGCCTTGGCA GCGAAGTCGG ATTTGGTGAT ATCAGTAAAC TGACCCAATC CGATGCGTTG
GCATTCAGAG CCAGATTCGA TGGCCAGGTG CCGGCCAATC CGGACCTCTA TTGGCGCGCG
CTGGTGCTGG AAGACTACGA TGGTGCCCAT TGGCGACAAC ACATTGGGAT AAAACGGCTC
GAACGGGAGG CCTTTCTACT GGGCAGCGGC CGCGCAGCGC CCGCAGATGG ACCGCAGCAG
ACATCAAACC GTCCCCGAAA AGACCGGTTG AATTACGAGG TCATTGCCGA GCCAAGCGGT
CAACGATGGC TGTTCGGTTT GGATGTGGCA CATTCCGATA CCCAGGGTGT GGTTAACCTG
CCTGATTATC GCCTGTTTGC ATTAAGACCG CTGGATGGAC GTTTTCAATA TCGCGCCAGC
GCCTTTGATG CCCGTATGGA CTCAAGGCTC CCAGACAGTG TGAGGCGCCT TAATCTTTCG
CTTCCCGATG GGATTAATCC CCGCACCCGT GAGCTGGTCA GTCAGCTTAA GGCCCAAAGC
GATTCACCAC AGGACTTTGT CCAAAGGCTG ATGACAAGGT TTCGTACAGA AGCCTATTTC
TACACCCTGT CACCGCCGCC GGTGGGCACC GCCCAGATAG ATGATTTCCT GTTTGATAAT
AAAAAAGGCT TTTGTGTGCA TTACGCCACC GCCTTGACGT TTATGGCCAG AGCCGCAGGT
ATTCCGGCAC GCCTTGTCTC GGGTTATCAG GGTGGCGAGC TGAACCCTGG GGCCGGTTAT
GTCAGCGTCT ATCAGTATAT GGCGCACGCC TGGAGTGAAG TTTGGTTTGA AGGCCGGGGT
TGGGTTCGGG TAGACCCCAC CGCCATGATA GCCCCTTCCC GTATCCTCGA TGGCTTTGAT
GCCACTTTCA ACCCGGATGA GAGTTACCTG GCAGAAAACC CTTTCAGTGG GCATAGAGTG
AAGGAGATCC CCTGGCTGAA TAATCTCAGG CTGAAGCTCG CCAGTATTGA TTATTACTGG
AGTGTATGGG TACTGGGTTT TGACAATGAA CGCAGGGAAG GTTTGCTTAA AGGTCTCCTT
GGCGGCCTTA ACCCCACCCG CCTAGTCCTG TTTGTATTGG GGATATGTGG CGCCATTTTG
CTGTTTGTGG CCTGGCAGGC GGGCATTTTG CGATTACCCG GCAGGCAACC CCCCTTGCTT
ATGGCGTTCG CACGGATTGA AAAGTCCCTG ACCTCTATCG GGCTGCCACG GAGAATTGCC
GAAGGCCCCG CGGATTATGC GGCCCGAGTG GGCGCAGCGA TGCCGCCACT GGCGATAGAC
CTTAGCCGCT GGGCCCTGCA GTTCAGCCAC CTGAGATATA GCAGTGACAA ACCAAGCCCG
AGGGCACTGC AACGCTTTGT CAAAGATAGC CGTGTCCTTG CCAGAGGCAT CCGTAAACAA
AGCAAAATTT CAACGACCAC CCCTGACTGA
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| Protein sequence | MMGPSTKHHA EIIGRSTLFW LLLTHFALIA PLAEKSTPWT LAISAICLVW RVGIFYGRVA
RPPRLLVTGL GIASAITLAL VGKQIGLLNA LMNLLILGYS LKTIEMLGKR DVRTVILVGY
FLIAINLIDN QGIGAMALAL TLFWLNTQSL LSLYRDPGSK RDALAVKLVL QSLPLAILLF
LVLPRLPPLW MVPSLKSSIT GLGSEVGFGD ISKLTQSDAL AFRARFDGQV PANPDLYWRA
LVLEDYDGAH WRQHIGIKRL EREAFLLGSG RAAPADGPQQ TSNRPRKDRL NYEVIAEPSG
QRWLFGLDVA HSDTQGVVNL PDYRLFALRP LDGRFQYRAS AFDARMDSRL PDSVRRLNLS
LPDGINPRTR ELVSQLKAQS DSPQDFVQRL MTRFRTEAYF YTLSPPPVGT AQIDDFLFDN
KKGFCVHYAT ALTFMARAAG IPARLVSGYQ GGELNPGAGY VSVYQYMAHA WSEVWFEGRG
WVRVDPTAMI APSRILDGFD ATFNPDESYL AENPFSGHRV KEIPWLNNLR LKLASIDYYW
SVWVLGFDNE RREGLLKGLL GGLNPTRLVL FVLGICGAIL LFVAWQAGIL RLPGRQPPLL
MAFARIEKSL TSIGLPRRIA EGPADYAARV GAAMPPLAID LSRWALQFSH LRYSSDKPSP
RALQRFVKDS RVLARGIRKQ SKISTTTPD
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