Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1881 |
Symbol | rnhA |
ID | 4604131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2296821 |
End bp | 2297291 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781258 |
Product | ribonuclease H |
Protein accession | YP_927756 |
Protein GI | 119775016 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.025157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC TGAAACAGAT CCGTATCTAC ACCGACGGTT CCTGTCTGGG TAACCCCGGT CCCGGTGGAT ACGGCGTGGT CATGATCTAT AAGCAGCACC GCAAAGAACT CGCGGATGGC TTTGCCCTGA CAACCAATAA CCGTATGGAG CTGCTGGCCC CCATAGTGGC ATTGGAAAGC CTTAAGGAAC CCTGCGATGT GATCCTGACC AGTGACAGCC AATATATGCG TCAGGGCATT ACCGAATGGA TCCATGGCTG GAAGAAAAAG GGCTGGGTGA CTGCCAGTAA AACGCCGGTC AAGAATGTGG ATCTGTGGCA ACGCCTCGAT GCCGCAGCCG CCAAGCACAA GGTGGATTGG CGCTGGGTGA AAGGCCATGC GGGCCACGCC GAAAACGAAC GCTGTGACAC TCTTGCCCGT GAAGCGGCCG AAGCAAAACC GACTCAAATT GATAAGGGCT ATCAGCCCTG A
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Protein sequence | MSELKQIRIY TDGSCLGNPG PGGYGVVMIY KQHRKELADG FALTTNNRME LLAPIVALES LKEPCDVILT SDSQYMRQGI TEWIHGWKKK GWVTASKTPV KNVDLWQRLD AAAAKHKVDW RWVKGHAGHA ENERCDTLAR EAAEAKPTQI DKGYQP
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