| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1840 |
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| Symbol | ruvA |
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| ID | 4604090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2241369 |
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| End bp | 2241986 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781216 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_927715 |
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| Protein GI | 119774975 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.175833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGGTC GTTTAAAGGG CATTTTGGTT GAGAAACACG CCCCAGAGGT ATTGATAGAT
GTGGGCGGTG TTGGCTATGA GCTGCAAATG CCGCTGACCT CCTTTTACGA GCTGCCACTG
CCTGGCGCCG AGGTCATTGT TTATACCCAT TTTGTGGTCC GTGAAGATGC TCAGCTTTTG
TATGGATTTA TCCATAAAGA AGAGCGCTCA CTGTTTCGTT TGCTGATCAA GGCCAATGGT
GTTGGCCCCA AGCTCGCGCT CACTATTCTG TCGGGCATGA CCGCCAAAGA GTTTATTGGT
TGCCTGGAAC GTGACGATAT CGCGACCCTG ATTAAGCTGC CCGGTGTGGG TAAAAAGACT
GCCGAACGTC TGCTGGTTGA GATGCGCGAC AAACTCAAGA GCCTGATGGA AGCCTCCATG
GGCGCTGAGC GAGAGTTTGT GCTTAAGAGC AACTTCACAC CGGCGCCGGT GGCTGCCACT
GTGGAAGAAG ATGCCATAGC CGCGCTCTTG TCATTGGGCT ACAAACCGCA GCAGGCAAGC
AAAGCCGTAT CCAGTGCCTT CCAGGAGGGC ATGGATCCCG AGCAGCTTAT CAAGGCTGCA
CTTAAGTCCA TGCTCTAA
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| Protein sequence | MIGRLKGILV EKHAPEVLID VGGVGYELQM PLTSFYELPL PGAEVIVYTH FVVREDAQLL
YGFIHKEERS LFRLLIKANG VGPKLALTIL SGMTAKEFIG CLERDDIATL IKLPGVGKKT
AERLLVEMRD KLKSLMEASM GAEREFVLKS NFTPAPVAAT VEEDAIAALL SLGYKPQQAS
KAVSSAFQEG MDPEQLIKAA LKSML
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