| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1820 |
|---|
| Symbol | |
|---|
| ID | 4604070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2216550 |
|---|
| End bp | 2217011 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639781188 |
|---|
| Product | metal-binding protein |
|---|
| Protein accession | YP_927695 |
|---|
| Protein GI | 119774955 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.581548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTC CCTGCCCTTG CGGCCTCGCA AGCTATCACA GCTGCTGCGA GCCCTTCCAC
TCTGGCAACA GGCACGCCCA AACGCCGGAA TCCTTGATGA GGTCTCGCTA CAGTGCGTTC
GTGCTTAACT TGTGGGGCTA TTTGATTGCA ACCCATCATC CAGGCCATCT TCATGGGCTT
AACGAATCCC AGCTGGCCGA GGGCCCACAT CCAGAGTGGC GAGGTCTCAC TGTACACGAA
AGTAAAAGTG ATACCCTCAG CGGAGAGGTG TTTTTCACCG CCTGGTACCT TGAAGCCGGC
AAGCTAGATG GCATTTGTGA ACGTTCATCA TTCGTTTTCG AGCAAGGTAA ATGGTTCTAC
ACCCACGGAA AGCAGTATGC ACCTAAGCTT CCCGGAAGGA ATGACACCTG TGTATGTGGC
AGCGGTAAAA AGCTCAAACA CTGTTGTTTG AGAAGTCAGT AG
|
|---|
| Protein sequence | MSTPCPCGLA SYHSCCEPFH SGNRHAQTPE SLMRSRYSAF VLNLWGYLIA THHPGHLHGL
NESQLAEGPH PEWRGLTVHE SKSDTLSGEV FFTAWYLEAG KLDGICERSS FVFEQGKWFY
THGKQYAPKL PGRNDTCVCG SGKKLKHCCL RSQ
|
|---|
| |