| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1791 |
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| Symbol | |
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| ID | 4604041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2183928 |
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| End bp | 2185364 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781157 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_927666 |
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| Protein GI | 119774926 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0398025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.231358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC ATTCCCAGCC ACACGGCGCT GATTACAATT ACACTGTCGT GCGCCAATTC
GCTTTAACCA CAGTTCTGTG GGGCATTGTT GGTATGTCCG TCGGTGTACT GATTGCGGCT
CAGTTAATCT GGCCCCAGCT GAACTTCGAT ACCCCTTGGT TAACCTACAG CCGCTTGCGG
CCATTACACA CCAATGCGGT GATCTTCGCG TTCGGTACCT CAGCGCTTTT CGCCACCTCC
TATTATGTTG TTCAACGTAC TTGTCAAACC CGTCTGTTTG CGCCAGCTTT GGCGTCATTC
ACCTTCTGGG GTTGGCAAGC TATCATTCTG GCTGCCGCCA TCACTCTGCC ACTGGGTATT
ACCAGCGGCA AAGAATATGC CGAGCTGGAA TGGCCAATCG ACATCGCTAT CGCCGTTGTA
TGGGTCAGCT ATGCGATTGT GTTCTTCGGT ACTATCGTAA AGCGCAAGAC TTCCCACATT
TATGTGGCGA ACTGGTTCTT CGGTGCCTTC ATCATCACGG TAGCTGTTCT GCACATCGTA
AACTCCATGG CTGTGCCTGT TAGCCTGTGG AAGTCTTACT CCATTTATGC CGGTGCGGTA
GATGCTATGG TGCAGTGGTG GTATGGCCAC AACGCCGTAG GCTTCCTGCT GACCGCTGGC
TTCCTGGGTA TGATGTACTA CTTCGTGCCT AAGCAAGCGG GTCGTCCAGT TTACTCTTAC
CGTCTGTCCA TCGTGCACTT CTGGGCACTG ATCGCACTGT ACATCTGGGC CGGTCCTCAC
CACCTGCACT ACACTGCCCT GCCCGACTGG ACTCAGTCTC TGGGTATGGT GATGTCACTG
ATCCTGTTCG CACCTTCATG GGGCGGTATG ATCAACGGTA TCATGACCCT GTCAGGCGCC
TGGCACAAAC TGCGCACTGA TCCAGTGCTG CGCTTCCTGG TGGTATCTCT GTCCTTCTAC
GGTATGTCTA CCTTCGAAGG TCCTATGATG GCCATCAAGA CAGTAAACGC GCTGTCTCAC
TACACTGACT GGACCGTGGG TCACGTACAC TCTGGTGCCC TGGGTTGGGT AGCCATGGTG
TCTATCGGTT CTCTGTATCA CCTGATCCCT AACCTGTTCG GTCATGGCCG CATGTACTCT
ACCTCTTTGG TAAACGTACA CTTCTGGCTG GCCACTATCG GCACCGTGCT GTACATCGTT
GCCATGTGGA TCTCCGGTGT AATGCAGGGT TTGATGTGGC GTGCAGTGAA CTCGGACGGC
ACCCTGACCT ACAGCTTCGT AGAAAGTCTG GAAGCCTCTT ATCCGTTCTA CTTCGTACGT
TTCCTGGGCG GCTGCTTCTT CGTAACCGGT ATGCTGATCA TGGCTTACAA CGTATTCCGC
ACTGTGAAGG CACCTAAAGA TTCACTGCCT GCACTGTCTG AAGCCAAAGC TGCATAA
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| Protein sequence | MMNHSQPHGA DYNYTVVRQF ALTTVLWGIV GMSVGVLIAA QLIWPQLNFD TPWLTYSRLR
PLHTNAVIFA FGTSALFATS YYVVQRTCQT RLFAPALASF TFWGWQAIIL AAAITLPLGI
TSGKEYAELE WPIDIAIAVV WVSYAIVFFG TIVKRKTSHI YVANWFFGAF IITVAVLHIV
NSMAVPVSLW KSYSIYAGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY
RLSIVHFWAL IALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA
WHKLRTDPVL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTVGHVH SGALGWVAMV
SIGSLYHLIP NLFGHGRMYS TSLVNVHFWL ATIGTVLYIV AMWISGVMQG LMWRAVNSDG
TLTYSFVESL EASYPFYFVR FLGGCFFVTG MLIMAYNVFR TVKAPKDSLP ALSEAKAA
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