Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1785 |
Symbol | |
ID | 4604035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2177393 |
End bp | 2177797 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639781151 |
Product | MerR family transcriptional regulator |
Protein accession | YP_927660 |
Protein GI | 119774920 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.370686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0498641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCC TACTGACTAT TGGAGAGGCT GCCAAAACGA GTGGACTCTC TACCAAGATG ATACGTCACT ATGAGCAAAC AGGATTACTG AAGAAATCCC CCCGAACTGA CTCGGGATAT CGCCTGTATA ACAACGAGCA AATCAATCAG CTCAGATTTA TCAGGCAAGC CCGAAACCTG GGATTTTCAT TGAATGACAT CCAATCCCTC CTTGGCCTGT GGCAAGACCC AAACAGGGAA AGCCGATTGG TCAAACAACT CGCAACCCAG CACCTGGACG ACATAAAAAT GAAAATCAGC GAGTTGCAAC ATATGCAGCT CATACTCACA GAGCTGGCAG AAAGTTGCTG TGGGGATGAA AATCCACACT GTAGTATTTT GCAAAAGCTC GCAAAACCGG ATTAA
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Protein sequence | MSTLLTIGEA AKTSGLSTKM IRHYEQTGLL KKSPRTDSGY RLYNNEQINQ LRFIRQARNL GFSLNDIQSL LGLWQDPNRE SRLVKQLATQ HLDDIKMKIS ELQHMQLILT ELAESCCGDE NPHCSILQKL AKPD
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