Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1781 |
Symbol | |
ID | 4604031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2173637 |
End bp | 2174056 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639781147 |
Product | DsrE-related protein |
Protein accession | YP_927656 |
Protein GI | 119774916 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.111826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0472692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCACT TCGAGGGCCA TTTTTTTATT ATGAGCACAT TTATTCTTCA GGTATCAGGT AAAGCCTATG GTAGCGCAGC GCCCGTGCAC GCGCTCAGGT TTGCCAAGGC CGCAATCGAC GAAGGCCACC ACATTCTTCA GGTATTTTTT TATCAGGATG GCGTGTTTAA CGCATCGAGC CTCGGTTCGC CAGCATCCGA TGAGTTCAAC GTGTATCAGG CTTGGCAAAA ACTGGCCAAA CTACACAATG TTGAACTGGT CAATTGCGTG TCTGCGGCCT TAAGACGAGG CATGGTGGCG AAAGAAGAAG CTGAAACCCA AGGGCTCAGT CATTGGAATG TGGATGAACA TTTCACTAAC GGCGGCCTGG GCGAGTTGGT AAGTGGCATC GCCAAAGCCG ACCGGCTCAT CTGTTTCTAA
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Protein sequence | MAHFEGHFFI MSTFILQVSG KAYGSAAPVH ALRFAKAAID EGHHILQVFF YQDGVFNASS LGSPASDEFN VYQAWQKLAK LHNVELVNCV SAALRRGMVA KEEAETQGLS HWNVDEHFTN GGLGELVSGI AKADRLICF
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