Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1771 |
Symbol | |
ID | 4604021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2165266 |
End bp | 2165769 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639781137 |
Product | leucine-responsive transcriptional regulator |
Protein accession | YP_927646 |
Protein GI | 119774906 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000022114 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0203642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATATA ATAAAAAGAA TCCGGTTAAA GACCTGGATC GCATCGATCG CAATATCCTT AATGAACTGC AAATTGATGG AAGAATTTCA AATGTTGAGC TGTCCAAACG GGTAGGGCTG AGTCCAACCC CTTGTTTGGA AAGGGTTAAA CGCTTAGAAA AGCAAGGGTA TATCAATGGC TACACCGCCT TGGTAAACCC ACATTACTTG GGCGCCTCGC TGCTGGTTTT TGTTGAGATC ACCCTGAACC GGGACACACC AGAGGTGTTT GATCGCTTCA ATCGTGCCGT GCAGCTACTG GACGATATTC AGGAATGTCA CCTGGTTTCC GGTGATTTCG ACTATTTGCT CAAGACCCGC GTTTCTGACA TGTCTGCCTA CCGTAAGCTC TTGGGCGAAA CCTTGCTGAA ATTGCCTTCT GTGTCCGACA CCCGTACCTA CGTCGTGATG GAAGAAGTTA AGCAGACCAA TAAGGTCGCG GTAAACAACA TCTCTGACAA GTAA
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Protein sequence | MAYNKKNPVK DLDRIDRNIL NELQIDGRIS NVELSKRVGL SPTPCLERVK RLEKQGYING YTALVNPHYL GASLLVFVEI TLNRDTPEVF DRFNRAVQLL DDIQECHLVS GDFDYLLKTR VSDMSAYRKL LGETLLKLPS VSDTRTYVVM EEVKQTNKVA VNNISDK
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