| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1731 |
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| Symbol | |
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| ID | 4603981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2118311 |
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| End bp | 2121016 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781094 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_927606 |
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| Protein GI | 119774866 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0884555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00443229 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGATT TGGCTTCATC TATTTCGCCA ATTAATATCG AAGACGAACT CAAGAATTCG
TACCTGGATT ACGCCATGAG CGTGATCGTG GGTCGGGCAC TGCCGGATGT GCGTGACGGC
CTTAAGCCTG TGCATCGCCG TGTGCTGTTC GCGATGAACG AACTTAAAAA CGACTGGAAC
AAGCCTTATA AAAAGTCGGC ACGTGTGGTC GGTGACGTTA TCGGTAAATA CCACCCTCAC
GGCGACAGCG CTGTATACGA CACCATAGTC CGTATGGCCC AGCCGTTCTC GTTGCGTTAC
ACCCTGGTAG ACGGTCAGGG TAACTTCGGT TCTATCGACG GCGACGCCGC AGCAGCAATG
CGTTATACCG AAATCCGCAT GGAAAAGCTG GCTCACGAGC TGCTCGCGGA TTTGGAAAAA
GAAACGGTAG ACTTCGTGCC CAACTATGAC GGCACAGAAC AAATCCCTGC CGTTCTGCCT
ACCAAAATTC CCAACCTGCT GGTAAACGGT GCCTCCGGTA TCGCCGTGGG TATGGCTACC
AATATTCCGC CTCACAACCT GACCGAAGTG GTTAAAGGTT GTTTGGCGCT GATTGAAGAG
CCTGAGCTGT CCATCGAACA GCTGATGGAG TACATTCCAG GCCCTGACTT CCCAACTGCC
GCCATCATCA ATGGCAAAAA GGGCATAGAA GAAGCCTATC GCACCGGTCG CGGCAAGGCC
ATTATGCGTG CCCGCGCCGA AGTGGAAATC GAAGACAACG GCCGTGAGCG CATTATTGTC
ACCGAGATCC CGTATCAGGT GAACAAAGCC CGTCTGATTG AAAAAATCGC CGAGCTGGTA
AAAGACAAGA AGATTGAAGG CATCAGCGGC CTGCGTGATG AGTCCGACAA GGACGGCATG
CGCATCGTGA TTGAAATCAA GCGCGGTGAA GTAGGCGAAG TGGTTCTGAA TAACCTTTAC
GCCCAAACCC AGATGCAGTC GTCGTTCGGT ATCAACATGG TGGCACTGGC CAACGGTCAG
CCAAAGCTGT TTAACCTCAA GGAGATGCTG GAAGCCTTTA TCCTGCACCG CCGTGAAGTA
GTTACCCGCC GCACCGTGTA CGAACTGCGT AAAGCCCGTG ACAGAGCCCA TATTTTGGAA
GCGTTGGCGG TTGCCCTTGC CAACATCGAC CCCATCATTG CCCTTATCAA GGCCTCTGCC
AGTCCTTCCG ACGCCAAAGC AGGCCTGATT GCCAAGGGGT GGGAACTCGG CACTGTTAAA
GCCATGCTGG AAAAGGCCGG TGACGACGCC GCCCGTCCCG AGTGGCTGGA GCCCGAGTTC
GGTATTCGTG ATGGTCTCTA CTTTATGACC GAGCCACAGG CCCAGGCAAT TCTGGACCTG
CGTCTGCATA AGCTGACTGG CCTTGAGCAT GAGAAGATCC TCCAGGAATA CGAAGAGCTG
CTGGAAATCA TTGCCGGTTT GCTTCACATC CTCAGAAGCC CAGAGCGTCT GATGGAAGTC
ATCAAAGAAG AGCTTGAGCT GATTCTCGAA CAGTTTGGCG ATAACCGCCG CACTGAAATC
AACGCATCTG CCGTGGATAT CAGCCTCGAA GATCTGATTA ACGAAGAAGA CGTGGTAGTG
ACCCTGTCGC ACCTCGGCTA CGCCAAGTAT CAGCCGCTGA CCGACTACCA GGCCCAGCGC
CGCGGTGGCA AGGGCAAAGC TGCAACCAAG GTAAAAGACG AAGATTTCGT TGAAAAGCTG
CTGGTTGCCA ACACCCACGA CACCATCTTG TGCTTCTCCG ACTTCGGTAA GCTCTACTGG
CTTAAGGTTT ACCAGCTGCC GCTGGCAAGC CGTCAGGCCC GTGGTCGCCC CATCGTTAAC
CTGCTGCCAT TGCAGGAAGG TGAACGCATT ACCGCGATTC TGCCGGTGCG TGAATACGAA
GAAGGCAAGT ATATCCTGAT GGCCACCTCT CACGGTACCG TGAAGAAGAC TGCCCTGACC
GAGTACAGCC GTCCACGCTC CAACGGTATT ATTGCTGTGA ACCTCAAAGA CGGTGACCAG
CTGATTGGCG TTGATATTAC TGATGGCAGC AGCGAAATCA TGCTGTTCTC TGATGCCGGT
AAAGTGGTGC GCTTCAAAGA AGGCGAAGAA GTTGCCGTAG TCGATGAAAA CGGCAACCCT
GTGCTGGATG AAGAAGGCAA GCCACAAATC AACTTCAAAG GCGTGCGCCC AATGGGCCGC
GGTGCCACCG GAGTGCGTGG TATTGCCCTG GAAGAAGGCC AACGTGTGGT GTCGCTGATT
GTACCGAAAG ACGACAGCGC CATTCTGACC GTGACTGCCA ACGGCTTTGG TAAGCGTACT
GAGCTTGCTG AATACCCGGC CAAGAGCCGC GCCACCAAGG GCGTGGTGTC CATCAAGGTC
ACCGAGCGTA ACGGCCCTGT GGTTGGCGCC GTACAGGTGG GCGAGAACGA TGAAATCATG
CTCATCAGCG ACAAGGGTAC CCTGGTGCGT ACTCCTGCCA TTGGTGTGTC CATCATCGGC
CGAAACACCC AGGGTGTAAC CATCATACGT ACCGCTGACG ATGAAACCGT GGTTGGTCTG
CAGCGCATCG ATGAAATACA GGATGACGGC AGCGAATATC TGGAAGAGGG TGTTGAAGGA
GCCGAGGGCG ACATCATCGC CGAAGCCGAT ACACAGCCGA CAGATGATGC CAACGACGAG
GCATAA
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| Protein sequence | MTDLASSISP INIEDELKNS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMNELKNDWN
KPYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY TLVDGQGNFG SIDGDAAAAM
RYTEIRMEKL AHELLADLEK ETVDFVPNYD GTEQIPAVLP TKIPNLLVNG ASGIAVGMAT
NIPPHNLTEV VKGCLALIEE PELSIEQLME YIPGPDFPTA AIINGKKGIE EAYRTGRGKA
IMRARAEVEI EDNGRERIIV TEIPYQVNKA RLIEKIAELV KDKKIEGISG LRDESDKDGM
RIVIEIKRGE VGEVVLNNLY AQTQMQSSFG INMVALANGQ PKLFNLKEML EAFILHRREV
VTRRTVYELR KARDRAHILE ALAVALANID PIIALIKASA SPSDAKAGLI AKGWELGTVK
AMLEKAGDDA ARPEWLEPEF GIRDGLYFMT EPQAQAILDL RLHKLTGLEH EKILQEYEEL
LEIIAGLLHI LRSPERLMEV IKEELELILE QFGDNRRTEI NASAVDISLE DLINEEDVVV
TLSHLGYAKY QPLTDYQAQR RGGKGKAATK VKDEDFVEKL LVANTHDTIL CFSDFGKLYW
LKVYQLPLAS RQARGRPIVN LLPLQEGERI TAILPVREYE EGKYILMATS HGTVKKTALT
EYSRPRSNGI IAVNLKDGDQ LIGVDITDGS SEIMLFSDAG KVVRFKEGEE VAVVDENGNP
VLDEEGKPQI NFKGVRPMGR GATGVRGIAL EEGQRVVSLI VPKDDSAILT VTANGFGKRT
ELAEYPAKSR ATKGVVSIKV TERNGPVVGA VQVGENDEIM LISDKGTLVR TPAIGVSIIG
RNTQGVTIIR TADDETVVGL QRIDEIQDDG SEYLEEGVEG AEGDIIAEAD TQPTDDANDE
A
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