| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1715 |
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| Symbol | |
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| ID | 4606039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2097037 |
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| End bp | 2098110 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781078 |
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| Product | acriflavin resistance periplasmic protein |
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| Protein accession | YP_927590 |
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| Protein GI | 119774850 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000921401 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0591325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGC GACAACATTA CCGCCATGCA CTGGTCTTTT CGGCACTCAC CATCGGCCTG
CTTGGCTGCG AACAGGCGCC GGTTGAAGTC AAAGCAACCG GCGACATCTC TCGGCCAGCC
ATGATAGTGA CATTGCAGCC GCAGGGCATA TCGCAAACCC AGTTTACCGG CGTTGTCCGC
AGCGCTGAGC GGGCGGAGCT GGCCTTTAAA CAGTCGGGCA AGCTTGCCAG CATGACGGTG
CAGGAAGGTG ATAAGGTCAG CCGGGGGCAA ACACTGGCCA CTCTGGATGA TGCGGAGCTG
AAAACCGCGC TCAATTCTGC CAATGTTGAA TTTAAGCAGG CGCAAACCGA TTTTGACCGT
GGCAATAAAA TTTTCTCGAC CAGTCAGGCT ATCTCGCGCA GCGATTTGGA TCAGCTTAAA
GTTAAGCGCG ATCTGGCCGC CAACAAGGTT GCCAAGGCGC AGCAGGATTT GGCCAACGCC
AGTCTCAACG CCCCCTTTGA TGGCACAGTG GCACAAAAGC TGGTGAATAA CTTTGCCACG
GTGCAGCCCA ATCAGCCGGT TTACGTTGTG CACAATCCTG CCAATCTGGA AGTGATGATC
AATGTGCCCG GCAAACTGTT TCTTGAGCCC AATGCCGGTC AGCGGGCGGT GGCAGAAATC
GAAGGCCTGG CCGGGCAGCG TTTTGGCCTG ACCTATCGCT ACTACGCCGC CGATGCCGAC
CCGGTATCGC AAACCTATCA GGTCGTGCTG GGCTTTGATG ACCCAAGCGC CGCCAATCTG
TTGCCGGGCA TGAGCGCCAA GGTGTATCCG GTGATGGACA GCGCCGCGCA AAACCAGCAT
CTGCTGGTGC CTGTGGATGC GGTGGTGCCT TCAAATACCG GCAGCCAGTT TGTCTGGTTG
GTGAATGCCG ACAGCAGTGT TGCCAAGCGC AGCATCCGTG TTGGCAATAT TTTGGGTAAC
CAAATTCAGG TGACCGAGGG TTTAAGCCCG GGTGATAAAA TTGTCGTGGC AGGCGTTCAC
GCCCTGGCAG AAGGAATGAA GGTTCACCCA ATGCAGTCGG GGGAGTCTAA CTGA
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| Protein sequence | MTLRQHYRHA LVFSALTIGL LGCEQAPVEV KATGDISRPA MIVTLQPQGI SQTQFTGVVR
SAERAELAFK QSGKLASMTV QEGDKVSRGQ TLATLDDAEL KTALNSANVE FKQAQTDFDR
GNKIFSTSQA ISRSDLDQLK VKRDLAANKV AKAQQDLANA SLNAPFDGTV AQKLVNNFAT
VQPNQPVYVV HNPANLEVMI NVPGKLFLEP NAGQRAVAEI EGLAGQRFGL TYRYYAADAD
PVSQTYQVVL GFDDPSAANL LPGMSAKVYP VMDSAAQNQH LLVPVDAVVP SNTGSQFVWL
VNADSSVAKR SIRVGNILGN QIQVTEGLSP GDKIVVAGVH ALAEGMKVHP MQSGESN
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