| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1710 |
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| Symbol | |
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| ID | 4603961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2089916 |
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| End bp | 2090893 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781073 |
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| Product | alpha keto acid dehydrogenase complex, E1 component, beta subunit |
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| Protein accession | YP_927586 |
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| Protein GI | 119774846 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0237639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAAA TGAATATGTT GCAAGCCATC AACAGTGCCC TGCGCATTGC GATGGAAAAA
GACCCGACCA TGTTAGTGTT CGGGGAAGAC GTGGGCCATT TTGGTGGCGT GTTTCGCGCG
ACCTCCGGCC TGCAGGATAC CTTTGGCAGG GGCCGCTGCT TTAACACCCC GCTGACAGAG
CAGGGCATTG CCGGTTTTGC CAATGGTCTG GCCTCTAACG GCACCACTGC TGTGGCCGAA
ATTCAGTTCG CCGACTACAT CTTCCCGGCA TTCGACCAGA TTGTAAACGA GAGTGCCAAG
TTCCGTTATC GCTCAGGTAA CGAGTTCAAT GTGGGCGGCC TGGTGTATCG CACCCCTTAT
GGGGGCGGTA TCGCCGGTGG TCACTATCAC TCTCAGTCGC CTGAAGCGTA TTTCACCCAG
ACCCCGGGGC TCAAGGTGGT TGTACCCCGT AACGCACATC AGGCCAAGGG CCTGCTGCTG
GCATCGATTC GCGACAAAAA TCCTGTGGTG TTCTTCGAGC CCAAGCGTCT GTACCGTGCC
AGTGTTGGCG AAGTGCCTGA AGGTGATTAC GAGCTGCCAC TGGGTAAGGC CGAAGTGGTG
AAAGAGGGCA AAGACATCAC ACTGCTCGCT TGGGGCGCGC AGATGGAAAT CGTCGAAAAA
GCTGCCGAAA TGGCCGAAAA AGAAGGCATT TCCTGTGAAA TCATCGACCT TCGCACCCTG
TCACCCTGGG ATGTGGACAC AGTGGCCGAG TCGGTGAAAA AGACCGGCCG TTTGCTCATT
AACCACGAAG CGCCGCTCAC CGGTGGCTTT GCCGGCGAAA TCGCGGCGAC CATTCAGGAA
GAGTGCTTCC TGTATCTGGA GTCGCCCATC GCCCGGGTTT GTGGTTTGGA TACCCCGTAT
CCGCTTATCC ACGAAAAAGA ATACATGCCG GATGCGCTCA AGACATTTGA AGCCATCAAG
GCCAGCGTCA ACTTCTAG
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| Protein sequence | MAEMNMLQAI NSALRIAMEK DPTMLVFGED VGHFGGVFRA TSGLQDTFGR GRCFNTPLTE
QGIAGFANGL ASNGTTAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFN VGGLVYRTPY
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NAHQAKGLLL ASIRDKNPVV FFEPKRLYRA
SVGEVPEGDY ELPLGKAEVV KEGKDITLLA WGAQMEIVEK AAEMAEKEGI SCEIIDLRTL
SPWDVDTVAE SVKKTGRLLI NHEAPLTGGF AGEIAATIQE ECFLYLESPI ARVCGLDTPY
PLIHEKEYMP DALKTFEAIK ASVNF
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