| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1624 |
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| Symbol | |
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| ID | 4603876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1988789 |
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| End bp | 1989376 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780988 |
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| Product | periplasmic nitrate reductase C-type cytochrome, NapC/NirT |
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| Protein accession | YP_927501 |
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| Protein GI | 119774761 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.123114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.442563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGAAA AGCTTAAAAA AGTATGGCGA ACCCTCAGGA AGCCCAGTGT GCATTACAGC
CTTGGTTTCC TGACCCTTGG AGGCTTTGTG GCCGGTATCA TCTTCTGGGG GGGCTTTAAC
ACCGCCCTGG AAGCCACCAA CCAGGAGGCT TTCTGTATCG GTTGTCACGA GATGGAAAAC
AACGTCTATG AAGAGCTGAA GACGACTATC CACTTCACCA ACCGAAGCGG CGTGCGTGCA
ACCTGTCCGG ATTGCCACGT GCCGCACAAC TGGACCGATA AGATTGCCCG TAAGATGCAG
GCATCGAAAG AGGTGTGGGG TAAGGTGTTT GGTACCATCA ACACCCGTGA GAAGTTCGAG
GCCAAGCGCC GTGAGCTGGC AGAGCATGAA TGGGCGCGTT TAAAGGCGAA TGACTCGCTG
GAATGCCGAA ACTGCCACAA CTTTGACTAC ATGGACTTTA CCCGTCAGTC ACCGAGGGCG
TCGCAAATGC ACTCGACCTC ACTGGCCAGC GGCGAAAAGA CCTGTATCGA TTGTCACAAG
GGGATTGCGC ATCACCTGCC TGACATGTCC GGTGTCAAAG GCTGGTAA
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| Protein sequence | MWEKLKKVWR TLRKPSVHYS LGFLTLGGFV AGIIFWGGFN TALEATNQEA FCIGCHEMEN
NVYEELKTTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTREKFE
AKRRELAEHE WARLKANDSL ECRNCHNFDY MDFTRQSPRA SQMHSTSLAS GEKTCIDCHK
GIAHHLPDMS GVKGW
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