Gene Sama_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1613 
Symbol 
ID4603865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1971884 
End bp1972375 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content48% 
IMG OID639780977 
Producthypothetical protein 
Protein accessionYP_927490 
Protein GI119774750 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.148751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTG TAATTTCATC GCCGGCGATG GCCAGCCGTT CTACCCAAGG CAGCAGGATG 
CTGAGTATGT TTAACCGCCA CACCCAGGAA GAAGGTCAGG GAGCTTATTG GGTTGATGGT
AAATATCAAA AAGAGATTTT GACCGACTTT GATCATCTTT TGCGTGATCA TCGAGCAAAT
ATTGCAGCAC CAATGGATAA GCGATTGTAT GACCTGCTTT TTCATTTGCA GGAAAACCTA
AAAACCAAGG ATACAATCCA CATTATTTCC GGTTACCGCT CACCGCAGAC CAATGCTATG
TTGGCTAAAA AAAGTGGGGG AGTGGCCAAG AAAAGCTTGC ATATGGAAGG CAAGGCCATC
GACATTGCCA TACCGGGGAT CCGTCTGGAC CGACTGAGAG ATGCCGCCAA AGAACTTAAG
CTGGGTGGCG TTGGTTACTA TCCCCAGTCT GGGTTTGTGC ATGTGGACGT GGGGCGTGTG
CGCAGCTGGT AA
 
Protein sequence
MFSVISSPAM ASRSTQGSRM LSMFNRHTQE EGQGAYWVDG KYQKEILTDF DHLLRDHRAN 
IAAPMDKRLY DLLFHLQENL KTKDTIHIIS GYRSPQTNAM LAKKSGGVAK KSLHMEGKAI
DIAIPGIRLD RLRDAAKELK LGGVGYYPQS GFVHVDVGRV RSW