Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1606 |
Symbol | |
ID | 4603858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1962014 |
End bp | 1963744 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780965 |
Product | ATP-dependent protease |
Protein accession | YP_927483 |
Protein GI | 119774743 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000440956 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCAT CTTTGATTGC CGCTGAGCGG CTTAGCCCTG CCTTTCATCT TCCCACTGGC CTGCCAGACA ATCCCGGTCT CGGACATTTG CTGCTATGTC AGGACAGACT CCTTGACGCT TTCACCCTGG CAAGTCAAAT TCCATCCCAG CACTTATTTT TGGCCGATTT TCCAGGCGTG CACCGGGAGT CATTGTTTAA AGCGCTGGCA CAAGCGGCAC CAGTCCCGCC AAGAGAGCTG GTTGCGCGAC GTCACGAAGC CGGCACTCAA CTGGTTTGGG AAACCGCCCG CCAAGGCGAG CACGGCTCAC TCGCCCGCGA GCATGGATTT TTCACCGTGC TGGGGCACCA GATAAAGCGC GCCGATTTAT TGGGCAACAT GGTTGAAGAC AGCAACGGCA AGGCACAATA CCGCCCCGGA GCCCTCGCCA GTTATCCCTA TATCTTTATC TGCGTAGAAG CACTCTATCG CCGGGAAGGC CTGTGGCAAG TCTTGTTGGA CGTGCTCGAC AAAGGCTACT ACCGCGTTGG TAAAGACATG AACATCCCGC TGCAATCGAC CATCATCCTG GTTGGCAGTG CACTGCAGTA TTCTGAACTG CGCGCCCATG ACAGCAGCTT CAGCCGCCAT TTTCCCCTGC TGGGTGAAAT GGCCCACGAG CTCAATCTGA CGGTCAAGTC CGAAAAAGAG TATGGTCTTT GGTTAAAAGC CCTCGCTCAC GAAGGCGGCT ACCAACTTGA CGACTCCGCA ATGGCTCCCC TCTTCAACTT TGCAGCAAGA GAATGTGAAC ATCAGCAGCG TCTGTCACTC TCTGGTCAGG ACTTGGTACA ACTGTTCGCC CAGGCCGCAG TATATGGTCG CTCTGGCAGA CTGGATGCGA ATGCCATCGA CAAGGCCATT AAGCAACTTA CCCGCCGTCA CAACAGCTCA GAACGCTTCT CTGCCCAGAG TTTCGATGAC AGTTTTATCA ACCTCCCCAC TGACGGAGAA ATGATTGGCC AGATTAATGG CCTCACTGTT ATCGACAGTG TTGACTATGC CTATGGTGAG CCAGCACGAA TAACCGCAAC TGTGCACTAT GGTGACGGTG AAGTCGCCGA TATTGAACGC AAATCAGAAC TCGGCGGCAA TATCCATGCG AAAGGCATGA TGATCCTTTC AGCTTGCCTG TATCGTATTT TTGGTCGTGA TGCACCGCTT CACCTGAATG CCAACATAGT ATTCGAGCAG TCATATCAGG AGATTGATGG CGATAGCGCC TCCCTTGCGG AGTATTGCTG TTTAATGTCT GCTATTGCAG AGCAGCCAAT AAAACAATCA CTTGCCGTAA CAGGTGCGCT CGACCAGTTT GGCAATGTGC AGGCAATTGG CGGTGTTAAC GAGAAAATTG AAGGCTTTTT CAATCTGTGT GAACGTCGAG GTCTCACGGG CGAACAAGGG GTCATCATCC CCAGGGCCAA CATGTTGCAG CTGAACCTCG ATAAAAAAGT GATAGACGCC GTATCCAAGG GACTGTTCCA CATCTATCAG GTCGCGCACA TGGACGAAGC GGTAGAGATG TTGATGGCGC TACCTGCTGG CAAGGCCGAT GAAGAGCATA ACTTCCCTGA GAATACGCTC TATGGCCTGG TTCAGACCAG ATTGGATAAA CTGGCGGGTG ATGAGCCTCT GGACGAACCA GAGGGGTTCT TTGCTTCTCT GCTCGCAAAA TGGCCATTTT CCAGAGCCTA A
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Protein sequence | MHPSLIAAER LSPAFHLPTG LPDNPGLGHL LLCQDRLLDA FTLASQIPSQ HLFLADFPGV HRESLFKALA QAAPVPPREL VARRHEAGTQ LVWETARQGE HGSLAREHGF FTVLGHQIKR ADLLGNMVED SNGKAQYRPG ALASYPYIFI CVEALYRREG LWQVLLDVLD KGYYRVGKDM NIPLQSTIIL VGSALQYSEL RAHDSSFSRH FPLLGEMAHE LNLTVKSEKE YGLWLKALAH EGGYQLDDSA MAPLFNFAAR ECEHQQRLSL SGQDLVQLFA QAAVYGRSGR LDANAIDKAI KQLTRRHNSS ERFSAQSFDD SFINLPTDGE MIGQINGLTV IDSVDYAYGE PARITATVHY GDGEVADIER KSELGGNIHA KGMMILSACL YRIFGRDAPL HLNANIVFEQ SYQEIDGDSA SLAEYCCLMS AIAEQPIKQS LAVTGALDQF GNVQAIGGVN EKIEGFFNLC ERRGLTGEQG VIIPRANMLQ LNLDKKVIDA VSKGLFHIYQ VAHMDEAVEM LMALPAGKAD EEHNFPENTL YGLVQTRLDK LAGDEPLDEP EGFFASLLAK WPFSRA
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