| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1600 |
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| Symbol | rlmL |
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| ID | 4605959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1954713 |
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| End bp | 1956839 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780959 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_927477 |
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| Protein GI | 119774737 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACT TTTTTGCAGC CGCCCCAAAG GGCTTTGAAT ATGCACTTGC CAAAGAATTG
GAAACCCTTG GCGCAGAGAA CGTGCGCGAA AGCGTCGCCG GCGTGTATTT CAGTGCCTCG
TTGGCGCAAG GCTACCAGAT TACCCTGTGG ACACGTTTGG CCAGCCGTAT CGTTCTGATC
CTTTTCACCG GTGAGTGCCA GAGCGCTGAG CAACTCTACA ATGCGGCTTA CACCATTGAT
TGGCCATCGC ACTTCAGCAA TCGCAGTACC TTCAGCATCG ATTTTCACGG TACCGGCGGC
TTTATCAATA ACAGCCAGTT TGGTGCACTG AAAATCAAAG ATGCTGTAGT CGACAGATTC
CGTGATGACG ATTTAAGTCG CCCGGATGTG GTTAAAGGCC ATCCGGACAT GCGTATCGAC
GCCCACTATG GCCGCGGTAA AATTACCATC GGGATTAACT TTTCCGGCGC GGCGCTGCAC
CAGCGTGGCT ATCGCGGCAA TACCGGCGAA GCGCCATTGA AAGAAAACCT TGCCGCCAAC
ATGTTGTATC GCAGTGGTTG GGCCGACAAT CCGGTTACCT TGCTGGACCC TTTCTGCGGC
AGTGGCACTG TGCTGATTGA GGCTGCATTG ATGGCCTGTG ATATTGCGCC GGGCCTGATG
CGAGAACGAT TTGGCTTTGA ACACTGGCGC AGACACGACC AGGCCCTCTG GCAACAGGTA
ATCGAGGAAG CCAAGGCCCG TGCTTCTCTG GGTAAAACCC GATGTCAGCT TAAGTTTTAT
GGCTCGGATA TAGACTCGCG GGTTGTAGCG CTTGCCAAAC GCAATGCCAA CAGTGCCGGT
GTGTTTGACT TTATCGACTT TAAAGTGGCC AATGCCCTTA ATCTGGAGCC GCCGGTGGCA
GAGGGTATGG TGTTGACCAA CCCGCCTTAT GGTGAGCGCC TGGGGAATGT CACCAGCTTG
CTGCAGCTCT ACTTCCAGCT TGGTGAAAAG TTCAAGCAGA GCTACGGTGG CTGGAAGCTC
GGTTTGCTTT GCAGCGATAT GGAGTTGGTA TCTTCGCTAA AGCTCAAAGC CGACAAACAG
ATGAAGATGT ACAACGGGGC TCTGGAATGC GCCTTTAATC TGTATACCCT GCATGCCACC
AGTACCCGTC GTGATATTCC TGTGGATACC ACGGGCCAGG GCGGCGAGAT TGCCGCGCCT
TTTGCCAATC GTTTGAAGAA AAACCTCAAG CAGCTGGAAA AATGGGCCAA GCGAGAAGGC
ATCGACAGTT ACCGTCTGTA CGACGCCGAT ATCCCCGAAT ACAACGTCGC CGTCGACCGA
TACCTGGATT ACGTGGTAGT GCAGGAATAT GCGGCGCCTT CAGCCATTCC TGAAGCTGTC
ACCAAAAGAC GCCTCACCGA TGTGCTGCTC GCCTTGCCAC GTGCGCTTGG TATAGACCCG
GACAAGATAG TGCTTAAAAC CCGTGAGCGT CAGAAGGGCA CCAATCAGTA CCAAAAATTG
GATGGTGAAA AGCTTGAGCT TGTGACCACC GAGTATGGCT GCAGCTTCAA GCTGAACCTC
ACCGACTATC TGGACACTGG ACTGTTTCTC GACCACCGAC TGACCCGTAA ACTGGTGGGA
GAAAAGGCCA AAAACAGAGA TGTGCTTAAC CTCTTTGCCT ATACGGGCAG CGCGTCTGTG
CACGCCGGTA AGGGCGGTGC CAAATCTGTC ACTACAGTGG ATATGTCCAA TACCTATCTC
AACTGGGCCA AAGACAACTT TATGTTGAAC GGCCTGATTG GACGCCAGTA TCAGTTTGAA
CAGGCAGACT GCCTACAGTG GATCCGTGAT TGCGAAAGGC AGTTTGACCT GATTTTTATC
GACCCGCCCA CCTTCTCAAA CTCGAAGAGG ATGGAAGACT CTTTCGATGT ACAGCGTGAC
CACGTGGATT TGCTGGCATC CCTGAAAAAG CTGTTGCGTC CGGGGGGGGA AATTGTGTTC
TCCAACAATA AACGCAAGTT CAAAATGGAT ATGGAAGCCC TCGCGGCGGC TGGCCTCAAG
GCGGTAAACA TTGACGATAA GGTGTTGCCA ATGGACTACG CCCGTAATCC GCAAATCCAT
AACTGCTGGG TTGTGACCCA TGGCTGA
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| Protein sequence | MFNFFAAAPK GFEYALAKEL ETLGAENVRE SVAGVYFSAS LAQGYQITLW TRLASRIVLI
LFTGECQSAE QLYNAAYTID WPSHFSNRST FSIDFHGTGG FINNSQFGAL KIKDAVVDRF
RDDDLSRPDV VKGHPDMRID AHYGRGKITI GINFSGAALH QRGYRGNTGE APLKENLAAN
MLYRSGWADN PVTLLDPFCG SGTVLIEAAL MACDIAPGLM RERFGFEHWR RHDQALWQQV
IEEAKARASL GKTRCQLKFY GSDIDSRVVA LAKRNANSAG VFDFIDFKVA NALNLEPPVA
EGMVLTNPPY GERLGNVTSL LQLYFQLGEK FKQSYGGWKL GLLCSDMELV SSLKLKADKQ
MKMYNGALEC AFNLYTLHAT STRRDIPVDT TGQGGEIAAP FANRLKKNLK QLEKWAKREG
IDSYRLYDAD IPEYNVAVDR YLDYVVVQEY AAPSAIPEAV TKRRLTDVLL ALPRALGIDP
DKIVLKTRER QKGTNQYQKL DGEKLELVTT EYGCSFKLNL TDYLDTGLFL DHRLTRKLVG
EKAKNRDVLN LFAYTGSASV HAGKGGAKSV TTVDMSNTYL NWAKDNFMLN GLIGRQYQFE
QADCLQWIRD CERQFDLIFI DPPTFSNSKR MEDSFDVQRD HVDLLASLKK LLRPGGEIVF
SNNKRKFKMD MEALAAAGLK AVNIDDKVLP MDYARNPQIH NCWVVTHG
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