Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1588 |
Symbol | |
ID | 4603840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1933533 |
End bp | 1935608 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639780944 |
Product | hypothetical protein |
Protein accession | YP_927465 |
Protein GI | 119774725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000609017 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTG TTAAAAAGGG TTTTAACAAG ACGGCGCTTT CTTTGGGGGT TGCGTCAGCC CTGAGTCTGG GAAGTATTCC TGCTCAGGCG GTATCGTTCG ATTGGGGCGA AGTGCAAGGG TCTTTCGACT CGACCTTCAC TCTTGGTGCC AGTTGGCGCG TGGAAAAACG CGACTGGGAC GGCCAAATCG GTAAGGTAAA TCACCCCAGA TTTGATTGGT CCAACTATTC TGCATTTGGC AACACCAAGT ACACCTCGGC GGAAATCTGG GCTCAACCCG GTTCATACTC AAGTAACAAC GACTTGAGCA ACTTACTCTA TTCCCAGGGC GACACCACGT CTGAAATTTT CAAAGGTTTG CATGAACTGT CGCTGAAATA CGAAAACTTC GGTCTTTTCG CCCGTGGCAT GTATTTCTAT GACCGTAAGC TAAACGACGG TGACTTCGGT TTTTCTGATC CCATCACAGG TAAAGAGTTC GATCCCTGTG CAGACAAACG CGCGAAGGAA TTGCAGTGTA AGGACATCCG TCTGCTGGAT GCCTTTGTTT ATGCCAACTT TGACTTTAAT GATGGCCAGA ATCCGCTGAC TGTTCGCGTC GGTAATCAGG TGGTCTCATG GGGCGAAAGT ACGCTGATTG CCCACGGCAT AGGTGTAATT AACCCGGTTG ACCTGAACAT CCTTAATGCA CCCGGTGCGG AGCTCAAAGA GGCTTTCCGT CCACAGGGTA TGGTGTGGGC GTCTCTGGGT GTGACAGAAA ATCTCAGTCT GGAAGCCTTT TATCAGTATG ACTGGCAGCC CATTTGGGTT CCAACACCGG GTTCGATTTT TGCCACCAAC GACTTTGCCG GTTATGGCGG TTATCAGCAA AACGCCCAGC TTGGTTTTAA CGCCAACCCG GATATCAATC TGGACTTCAT TCAGGCCGAG TATGAAAAAC TGGCACAAAT GATTGTAGCC GGCGCCTTTT CATCTCCAGA AGGCACACAA AGTCTCATCC GTGCTGCACT GGCCTATCCA ACCAAGGTAA CCCTGATTCA GGACGAAGCC GAGGCGAGCG ATGATGGTCA ATATGGTATT AAGCTTGGGT ACTACGCCCC TGAGCTGGGT GAAACCGAGT TTGGTCTTTA CTATATGAAC TACCACAGTC GTCGTCCGCT TATCAGCGGC ACTGCGGCGA ACTTCGACTT GGTTCCTCTG CTTACTGACA TGACCACTGT TGGCATGAAT GCCGGTAATA TCGATCGCAA CCTCATCCTC GGACTCGAAA GTTTCTCCAA GGCTCAGATT GTGTATCCGG AAGACATCCA GCTCTACGGT TTCAGCTTTA ACACCCTGAT TGGCGATACC TCGGTTGCCG GTGAAATTGC TCACCGTCAG GACGAGCCGC TGCAGATCGA CGACGTGGAA CTCCTGTTTG CCGCGATGCC GCAGCAGCTG GCGAATTCCA ATGTGGTCGG CGGTGATTAC AGCTACCTCG ATGGTCTGTC TCAGTACACC TCTTACTTCA ATAAAGATGT GAATCCAGGT GATTATGCCG AAGGCTTTAT CCGAGTGGAT ACCACTCAGG CCCAGTTCAC CCTGACACAC CTCTTTGGCC CAACTCTGGG GACTGACAAC CTGACCATGC TTGCGGAAGT GGGTGGCATC TGGATCCACG ACATGCCATC ACCTGACGAG CTTCGTCTCA ATGGTCCTGG CACTGCCCGC AGCGGCGGTA AAGAAGGGTA CGAAGCCATT ATTCAGGTGC TGCACAATGG CCCTGAAACC AACCCATTCC CAACAGATTT TGCCTGGGGT TACCGTATTG TGGCCAAGGC CGACTACAAC AACCTGTTTG CCGGTATCAA CGTGTCGCCA CGGGTTATCT GGTCACACGA TGTTGACGGT ATCACGCCAG ATCCCCTGTT CCTGTTCACC GAGGGACGCA AGTCAGTGGC CGTGGGTATC AACTTTGACT ACCAGAGCCG TTGGGGCGCC GATCTGTCTT ACAACAGCTT CTTCGGTGGT GTAGGTACCA CCAACGCCAT GAGCGATCGC GATTATGTGT CGTTCAATAT CAAGTATTCT ATCTAA
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Protein sequence | MKSVKKGFNK TALSLGVASA LSLGSIPAQA VSFDWGEVQG SFDSTFTLGA SWRVEKRDWD GQIGKVNHPR FDWSNYSAFG NTKYTSAEIW AQPGSYSSNN DLSNLLYSQG DTTSEIFKGL HELSLKYENF GLFARGMYFY DRKLNDGDFG FSDPITGKEF DPCADKRAKE LQCKDIRLLD AFVYANFDFN DGQNPLTVRV GNQVVSWGES TLIAHGIGVI NPVDLNILNA PGAELKEAFR PQGMVWASLG VTENLSLEAF YQYDWQPIWV PTPGSIFATN DFAGYGGYQQ NAQLGFNANP DINLDFIQAE YEKLAQMIVA GAFSSPEGTQ SLIRAALAYP TKVTLIQDEA EASDDGQYGI KLGYYAPELG ETEFGLYYMN YHSRRPLISG TAANFDLVPL LTDMTTVGMN AGNIDRNLIL GLESFSKAQI VYPEDIQLYG FSFNTLIGDT SVAGEIAHRQ DEPLQIDDVE LLFAAMPQQL ANSNVVGGDY SYLDGLSQYT SYFNKDVNPG DYAEGFIRVD TTQAQFTLTH LFGPTLGTDN LTMLAEVGGI WIHDMPSPDE LRLNGPGTAR SGGKEGYEAI IQVLHNGPET NPFPTDFAWG YRIVAKADYN NLFAGINVSP RVIWSHDVDG ITPDPLFLFT EGRKSVAVGI NFDYQSRWGA DLSYNSFFGG VGTTNAMSDR DYVSFNIKYS I
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