| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1551 |
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| Symbol | |
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| ID | 4603803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1887992 |
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| End bp | 1888819 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780906 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_927428 |
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| Protein GI | 119774688 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0639275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGG AAATTATTGA TTTCAGGCAA AGTCAGTCGC TGGCAGGTGC TGAGCTCAGT
CGCGCCTCTT ATCAACGCTT TGACTTTGGT CGTCATGTCC ATGAAGACCT GCACCTGGGC
GCAGTTATCC GCGGGGCTCA GGCGTTCAAT CACAAGGGTA CCGGACACAC CCTTTGCCGG
GGGGATTTGT CGACCTTAAG CCCGGACGAA TGCCACGATG GGATTGCGGC GACAGACACG
GGCTATGAAG TGCTGGTGTT GTCCCTGCCC CAATGGCATC TGGACCGGTT TGCCGCAGAG
CTTGGCATAA GCTTTGGTGG ATTTTGTCAG CCAAAGCGTA AAGATATGGC GCTTTATCAG
GCCTTTGTGT CCCTGCATCG GCTGCTTTAT CAAGCCGAAA ATCCCCTGTT GGAAGAAACC
GCATTGCTGG ACTTCTTTCA ACGCCTGCTG GGACAATGCT CCAAGTCTGA AAAAGTCACC
AACACAGGCA CTGTCAAAGC CGGATTAAGC CGCGAAATTC GTCTTGCAAA ATCACTGATG
GCCGACACCC CAGAGCCGGT GACACTTGAG CTTCTCGGGG ATGCAACAGG GCTCGGTCGC
TACCGGTTAC TACGCCATTT CAGGGCTCAA ACCGGGCTCA GTCCCCATCA ATGGCAACTA
AGACTAAGGC TTGAGCGGGC CAAAAAAAGT CTGATGCAAA ATGATGGTAA TTCGCTGACC
GACATTGCCC ATCAGCATGG CTTCAGCGAC CTTAGCCACT TTACTCGCCA CTTTCGCATG
GCCTTTTTAA CGTCACCCAG CGCCTATCGT CGCGCTATCA GGAATTAA
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| Protein sequence | MQQEIIDFRQ SQSLAGAELS RASYQRFDFG RHVHEDLHLG AVIRGAQAFN HKGTGHTLCR
GDLSTLSPDE CHDGIAATDT GYEVLVLSLP QWHLDRFAAE LGISFGGFCQ PKRKDMALYQ
AFVSLHRLLY QAENPLLEET ALLDFFQRLL GQCSKSEKVT NTGTVKAGLS REIRLAKSLM
ADTPEPVTLE LLGDATGLGR YRLLRHFRAQ TGLSPHQWQL RLRLERAKKS LMQNDGNSLT
DIAHQHGFSD LSHFTRHFRM AFLTSPSAYR RAIRN
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