| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1542 |
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| Symbol | |
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| ID | 4603794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1878698 |
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| End bp | 1879372 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780897 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_927419 |
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| Protein GI | 119774679 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAATTC TGGTTGTCGA AGACGATCCT TTATTGTCAC ATCACCTCAA AGTTCAATTG
AGTGAACTGG GCAATCAGGT CCAGGTTGCC AACACCGCAC AGGAAGGCTT TTATCAGGCC
ACCAATTACC CGATTGACGT TGCCATCGTG GATCTGGGCT TACCGGATCA GGACGGCATA
GAACTTATCA CTCGTTTGCG AGACGCCGAA CTCAAGGCGC CTATCCTTAT TCTGACCGCG
CGGGTGAACT GGCAGGACAA GGTCGAAGGA CTCAATGCCG GCGCCGATGA TTACCTGGTC
AAACCTTTCC AGAAAGAAGA GCTGGTTGCC CGTTTGGATG CCTTGGTGCG CCGCAGTGCG
GGCTTTGTGA AACCCCGGAT CACGTCAGGA TCGCTGGAAC TGGATCTGGC CGCCAAACAG
GTTACGCTCG ACTCAGAAGT ACTTGAAATC ACAGCATTTG AATATCTTAT TTTGGAATAC
CTGATGCGAC ACAGCCATGA AGTGGTAGCC AAACAAAGAC TGCTGGATGT GATTTATGGC
GATAAAGAGG GTGATCCGAA CACCATCGAA GTCATGGTCA GTCGGCTGCG TAAAAAACTG
ACCCGGGATG GTATGGATAA CCCCATAGTG ACCATTCGCG GCCAGGGTTA TAAATTCAAC
CTGCCCTGTA GCTGA
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| Protein sequence | MRILVVEDDP LLSHHLKVQL SELGNQVQVA NTAQEGFYQA TNYPIDVAIV DLGLPDQDGI
ELITRLRDAE LKAPILILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPRITSG SLELDLAAKQ VTLDSEVLEI TAFEYLILEY LMRHSHEVVA KQRLLDVIYG
DKEGDPNTIE VMVSRLRKKL TRDGMDNPIV TIRGQGYKFN LPCS
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