| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1537 |
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| Symbol | |
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| ID | 4603789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1873880 |
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| End bp | 1874827 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639780892 |
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| Product | magnesium and cobalt transport protein CorA |
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| Protein accession | YP_927414 |
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| Protein GI | 119774674 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0598] Mg2+ and Co2+ transporters |
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| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.34242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACTG CTTATGTTTA TGAAAATCGT CAATTGACTG TTCTTGAACT TGGCATTGAG
GACAGCCTTC CCCCATCGAC GCTGTGGCTG GATCTCTACA AGCCGGAAGA TGATGAGCGT
GAGTGGCTCG CCAGATTCTC GGTCGAAGAA TTACCCGACG AAGAAGACAT TAACGAAATC
GAAGCGTCCG CCCGTTTCTA CCAAAACAGC GATGGTTTGC ATATCAACTC TCTGTTCCCG
CAGCGGGTTG GGCAGGACGT TCGCGCTGTG AACGTATCCT TCAACTTACG GACTAAATTC
CTGCTGACCA TACGTGAAGA AGACGTGGGG CTTATCCGTC TGCTTCGAAA CTATCTGCGT
CTTGGCCGGC TTGAGGTGTC CACTCCTCAG GAGTTGTTTA TCGAGCTTTT CAATCTCAAG
GTGGATTACC TCTCCGACTT GATTGAAGAC GTTTACACAG TGCTCGAAAA CGTGGGGGAG
GAGGTATTTG AGAGCCAGGA GTTGGATGAT GTCTTTAAAC TCATCACCAT ACAGGAAGAT
GCCAACGGTA AAATCCGCCT GAGTTTGCTC GATACCCAGC GATCACTTAG GTACATGCAG
CGCTATTACC GGGGACAACT CTCAGACGAG GACATGAAAG ACTTGCGGGA GATGCTGTCG
GATATCGAGT CTTTGATGCC CCACAGCCAA TTTATCTTCG ATAAGTTGAA CTTTTTGCTG
GATGCGGCCA TGGGTTTTAC CAGTTTGCAG CAAAACAAAA TCATCAAGAT CTTCTCGGTT
GCCGCTGTGG TGTTTCTGCC TCCAACCCTC ATAGCATCCA GCTATGGCAT GAACTTTACC
ACCATGCCAG AGCTCGAGTG GCAATACGGT TACCCGATGG CCATTGCCAT GATGCTGGCC
AGTGCCGCCG GTACCTATTT CTTTTTTAAA CGCAAGCGTT GGTTGTAG
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| Protein sequence | MITAYVYENR QLTVLELGIE DSLPPSTLWL DLYKPEDDER EWLARFSVEE LPDEEDINEI
EASARFYQNS DGLHINSLFP QRVGQDVRAV NVSFNLRTKF LLTIREEDVG LIRLLRNYLR
LGRLEVSTPQ ELFIELFNLK VDYLSDLIED VYTVLENVGE EVFESQELDD VFKLITIQED
ANGKIRLSLL DTQRSLRYMQ RYYRGQLSDE DMKDLREMLS DIESLMPHSQ FIFDKLNFLL
DAAMGFTSLQ QNKIIKIFSV AAVVFLPPTL IASSYGMNFT TMPELEWQYG YPMAIAMMLA
SAAGTYFFFK RKRWL
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