| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1468 |
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| Symbol | |
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| ID | 4603720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1776898 |
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| End bp | 1777590 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780818 |
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| Product | putative macrolide efflux ABC transporter, ATP-binding protein |
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| Protein accession | YP_927345 |
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| Protein GI | 119774605 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.877737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGC TACAGGCATT GACCAAGTCC TTCAGGATGG GGGACGCCGA AGTTCAGGCT
CTCCGGGGCG TTGACATTCA TATCCGACAA AACGAATTCG TTGCCATTAT GGGGCCCTCA
GGCTCCGGTA AGTCCACACT CATGAACATC ATCGGCTGTC TCGACAGGCC TACGTCAGGC
AATTATCTGC TTAATGGCAG TGCCGTGGGT GGCTTGTCGG ACGATGCCCT GTCGGCGGTG
CGAAATCGTG AAATTGGCTT TGTTTTTCAA AGCTTTCATC TGCTTCCTCG GTTATCTGCG
CTGGACAATG TACTGTTGCC ACTGCGATTT TCTGAAACAC CCCGGGGGGA CAGGCAACAC
GCCATCGAAC TTCTTGAGCG GGTGGGTTTG GGGCAACGGC TCGACCATCG CCCCAATCAG
CTTTCTGGCG GTCAGCGTCA GCGGGTGGCC ATTGCTCGGG CGCTGGTCAA CCGCCCCACC
TTGCTGTTGG CCGATGAACC CACGGGGGCG CTGGACTCCA AGACCTCGGT GGAAATCATG
GCCCTGTTTG ATGAGCTGCA TCTAAGCGGC CAAACCATAG TGCTGGTGAC CCACGAAGAA
GAAGTGGCCG AGTGCGCCGG GCGAATTATC CGCATGCGCG ATGGTGTGGT GCAACAGGAC
AAGCAAAAGC CCAGGGAGGT GAGCAATGGT TAA
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| Protein sequence | MISLQALTKS FRMGDAEVQA LRGVDIHIRQ NEFVAIMGPS GSGKSTLMNI IGCLDRPTSG
NYLLNGSAVG GLSDDALSAV RNREIGFVFQ SFHLLPRLSA LDNVLLPLRF SETPRGDRQH
AIELLERVGL GQRLDHRPNQ LSGGQRQRVA IARALVNRPT LLLADEPTGA LDSKTSVEIM
ALFDELHLSG QTIVLVTHEE EVAECAGRII RMRDGVVQQD KQKPREVSNG
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