| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1428 |
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| Symbol | |
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| ID | 4603680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1739373 |
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| End bp | 1740575 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780778 |
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| Product | 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) |
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| Protein accession | YP_927305 |
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| Protein GI | 119774565 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.139692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCG AAATTAAGGT ACCCGTTCTG CCAGAATCCG TGGCTGATGC CACTATCGCC
ACCTGGCACG TTAAGCCTGG TGAGGCTGTA TCTCGTGACC AGAACCTGGT TGATATCGAG
ACCGACAAGG TTGTATTGGA AGTGGTTGCA CCAGAAGATG GCCACATCGC TGAGTTTCTG
GCCCAGGAAG GTGACACCGT TCTGGCCGAG CAGGTGATTG CCAAGTTTGT GGCCGGTGCC
GTTGCCGGTC AGGAAGTGAC CAAGGCGCAA GCCGAAGCCG CTGCCCCTGC TGCTGAAGCC
GCTAGCGATG AGAGCAACGA TGCACTGAGC CCATCAGTAC GCCGTCTGAT TGCCGAACAC
AACCTGGATG CCAGCAAAAT CAAAGGCACT GGTGTAGGTG GCCGTATCAC CAAAGAAGAC
GTTGACGCCT TCGTGAAAAG TGGTGCCGGT AAAGCTGCTG CTCCTGCGGC CAAAGCAGCT
GCTCCGGTGG CACTGTCTGG CGATCGCTCG GACAAGCGCG TGCCTATGAC CCGCCTGCGC
AAGACCATTG CCAGCCGTCT GCTGGAAGCC AAAAACTCTA CCGCCATGCT GACTACCTTC
AACGAAGTCA ACATGAAGCC TATTATGGAT ATCCGTAAGC AGTATCAGGA TATCTTCGAG
AAGAAGCACG GTATCCGTCT TGGCTTTATG TCTTTCTACG TGAAAGCGGT AACTGAAGCC
CTGAAGCGCT TCCCAGAAGT GAACGCGGCT ATTGATGGCG ATGACATCGT TTACCACAAC
TACTTCGACG TGAGCATCGC TGTGTCTACT CCCCGTGGTC TGGTTACGCC AGTACTGCGT
GACACCGACA CCATGAGCCT GGCTGACATC GAGAAAGCAG TACGCGATCT GGCCATCAAG
GGCCGTGACG GCAAGCTGAC TGTGGAAGAC ATGACCGGCG GTAACTTCAC TGTGACCAAC
GGTGGTGTAT TCGGCTCGCT GATGTCTACC CCAATTCTGA ACCTGCCACA GAGCGCTATC
CTCGGCATGC ACGCCATCAA GGACCGCCCA ATGGCAGTCA ATGGTCAGGT TGAAATCCTG
CCCATGATGT ACCTGGCTCT TTCTTACGAC CACCGTATCA TCGATGGCCG TGAGTCTGTT
GGCTTCCTGG TAACCATCAA GGAATTCCTG GAAGACCCAA CCCGTCTGCT GCTGGACATC
TAA
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| Protein sequence | MSIEIKVPVL PESVADATIA TWHVKPGEAV SRDQNLVDIE TDKVVLEVVA PEDGHIAEFL
AQEGDTVLAE QVIAKFVAGA VAGQEVTKAQ AEAAAPAAEA ASDESNDALS PSVRRLIAEH
NLDASKIKGT GVGGRITKED VDAFVKSGAG KAAAPAAKAA APVALSGDRS DKRVPMTRLR
KTIASRLLEA KNSTAMLTTF NEVNMKPIMD IRKQYQDIFE KKHGIRLGFM SFYVKAVTEA
LKRFPEVNAA IDGDDIVYHN YFDVSIAVST PRGLVTPVLR DTDTMSLADI EKAVRDLAIK
GRDGKLTVED MTGGNFTVTN GGVFGSLMST PILNLPQSAI LGMHAIKDRP MAVNGQVEIL
PMMYLALSYD HRIIDGRESV GFLVTIKEFL EDPTRLLLDI
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