| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1402 |
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| Symbol | |
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| ID | 4603654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1701207 |
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| End bp | 1702565 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780752 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_927279 |
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| Protein GI | 119774539 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00588198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0441628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC TCTCGCATTT CACCCTGCCG GGCGATTCAG TAATGATGCA AAAAGATTTT
TTATTTGGCG TCGCCACCGC CTCGTTTCAA ATTGAAGGCG ACGCTGAACA TCGTCAGCCC
TGTATCTGGG ACACCTTTTG CGATACCCCA GGCAAAATTG CGGATGGTTC GAACGGTCAG
GTTGCCTGCG ATCATGTCAA GCTCTGGCGT GACGATGTTG ACCTGATTGC CTCCCTTGGG
GTGGATGCCT ACCGCCTGTC CATCAGTTGG GGACGGGTGT TACATCCCGA TGGCAGTGTG
AACCAGCGCG GCATGGATTT TTACATTAAT CTCCTGGATG AGCTTGGTCG CCGGGGCATT
AACGTGTTCG TCACCCTCTA CCACTGGGAC TTACCTCAGC ATCTTGAGGA CAAAGGTGGC
TGGCTCAATC GTGACACAGC AGTGGCCTTT GCCAACTACG CCGCCATTGT GGCCAACGCC
CTGGGTAACA GGGTGTATGC CTATTCAACC CTGAATGAGC CATTTTGCAG CGCCTTTCTC
GGCTATGAGG CAGGTATTCA CGCTCCCGGC CACAAGAGCC GTCAGCAGGG CCGCACAGCC
GCCCACAATT TGCTGCTGGC CCACGGTATG GCAATGACTG AAATTCGACG GGAAGCACCA
GAGGCCAAAG CGGGCATAGT GCTTAATTTC AGCCCGGCTT ATCCCTACAC ATCCAGTGCC
GGGGATGCCA ACGCCGCCCG ACTGGCCCAT GAATATCACA ACACCTGGTA CTTGATGCCA
CTGATGGAAG GCCGTTATCC GGACATCATC AATCAACTCG AGCCCCATGA ACGCCCGGTT
GTGGAGCCCG GTGATATGGA TATCATCAGT ACACCAATCG ATTATCTGGG GATCAACTAC
TATACCCGTA ACGTCTACCG CGCTGGCGGC CCGCTTGGCT TTGAAGAAGT GCGTATCGAT
AACGTGCCCC GTACCGCCAT GGATTGGGAA ATTTGCCCCC AGGCCTTTAC CGACTTGCTG
ACAGGTCTGG CACAGGAATT TAACCTGCCA CCAATTTACA TCACTGAAAA TGGCGCTGCC
GAAGACGATG CGCCATTTAA CGGCACTGTG CACGACCCCA TGCGACTGGA CTATTTGCAG
TCTCATCTGC TGGCTGTTCA TCAGGCTATC GAACGCGGAG TGGATATCAA AGGCTACTTT
GCCTGGAGTC TGATGGACAA CTTTGAGTGG GCGGAAGGCT ACCGCAAACG CTTTGGACTG
GTCTATGTCG ACTATGGGAC CCAGCAGCGC ATACTCAAAT CCAGCGCCAA AGCCTATCAG
GGAATGCTTG CCATACGCCA AGAGGCCAGC CAACAATAA
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| Protein sequence | MTTLSHFTLP GDSVMMQKDF LFGVATASFQ IEGDAEHRQP CIWDTFCDTP GKIADGSNGQ
VACDHVKLWR DDVDLIASLG VDAYRLSISW GRVLHPDGSV NQRGMDFYIN LLDELGRRGI
NVFVTLYHWD LPQHLEDKGG WLNRDTAVAF ANYAAIVANA LGNRVYAYST LNEPFCSAFL
GYEAGIHAPG HKSRQQGRTA AHNLLLAHGM AMTEIRREAP EAKAGIVLNF SPAYPYTSSA
GDANAARLAH EYHNTWYLMP LMEGRYPDII NQLEPHERPV VEPGDMDIIS TPIDYLGINY
YTRNVYRAGG PLGFEEVRID NVPRTAMDWE ICPQAFTDLL TGLAQEFNLP PIYITENGAA
EDDAPFNGTV HDPMRLDYLQ SHLLAVHQAI ERGVDIKGYF AWSLMDNFEW AEGYRKRFGL
VYVDYGTQQR ILKSSAKAYQ GMLAIRQEAS QQ
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