Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1391 |
Symbol | |
ID | 4603643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1682171 |
End bp | 1682764 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780741 |
Product | putative NAD(P)H oxidoreductase |
Protein accession | YP_927268 |
Protein GI | 119774528 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0093464 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCATCTG TTTTGCTGCT GTTTGCCCAT CCATCGCAAC ATAAATCGGA AGTGTGCATG CCCATGTACC GGGTTGCCCA GTCTGTTCCC GGCGTGACCT GTGTGGATCT CTATGCCGAT TACCCCACAT TTAACATCGA CATTGTCACA GAGCAGCAGC GTCTTGCCGC CCATCAAGGG GTTATCTGGC TTTTTCCGCT TTATTGGTAT TCCACCCCCG CCATCCTAAA GGAATGGCAG GATCTGGTGC TTGAGTATGG TTTTGCCTAT GGCCCGGGTG GGACAAAGCT GCACGGGAAA TCCCTGCTCT GCGCCCTGAG TGCGGGTGGC AGCGAAGGTT CATATTGTGC CGAGGGTTAC AATCATTTTG GCCTGAGACA ACTCTTGTCG CCCATCGAGC AGACCGCGTC CCTTATCGGC ATGGACTACC TGCCACCTTT TGCGCTCTTT GGAGCCCGCT CGGCGGTGGA GGAGGGGCGG CTAGGGCCCC ATCTCGCGCG GTGGCGACAG CTGCTGGAAG CGCTGGTGGC TGGTGAAATA CCGGATACCG CTTGTGGGGC TGGGGTACCG GCAAAGCGGG AGACCTTGTC ATGA
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Protein sequence | MSSVLLLFAH PSQHKSEVCM PMYRVAQSVP GVTCVDLYAD YPTFNIDIVT EQQRLAAHQG VIWLFPLYWY STPAILKEWQ DLVLEYGFAY GPGGTKLHGK SLLCALSAGG SEGSYCAEGY NHFGLRQLLS PIEQTASLIG MDYLPPFALF GARSAVEEGR LGPHLARWRQ LLEALVAGEI PDTACGAGVP AKRETLS
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