| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1390 |
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| Symbol | |
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| ID | 4603642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1681305 |
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| End bp | 1682000 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780740 |
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| Product | hypothetical protein |
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| Protein accession | YP_927267 |
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| Protein GI | 119774527 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0092148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATAACGC TTCGCCCGGC CAATGAGCGG GGTCAAGCCA GCCACGGCTG GCTTGACAGT
TTTCACAGCT TTTCCTTCGC CGAATACTAC GATCCCAACC ACATGGGCTT CTCGGCACTG
CGGGTTATCA ACGACGATAC GGTGGCACCG GGCGCCGGAT TTGCGCCCCA CGGCCACCGG
GACATGGAGA TTTTAAGCTA CGTGCTGGCA GGAAACATCC GTCATCAGGA CAGCGAGGGC
AACATTGCCA CACTGCCTGC GGGCGAGTTT CAGTTGATGT CGGCCGGTAA GGGCATACGT
CACAGCGAGT ACAACGGCTC ACAAACAGAG GCGCTGAGGT TTTTGCAGAT TTGGATTATT
CCATCGACTC CGGGCGGTGA GCCCGGCTAT CAGCAAAAGC ACTTTGGCAG CCGTGAGGGG
CTCACCCTGA TTGCCAGCCC AGATGGGCGC GACGAGAGTT TCACTGTGCG CCAGGATGCC
TGTGTCTATC AGCTGCTGCT GTCGCCGGGT CAATCCATCG CCTTGCCGCT TGGCGCGCAT
CGTAACGGGT ATCTGCACCT GGTTGAGGGC GCCTTATCCG TCGAGGCCAT GGAGATGTCC
CCGGGCGATG GCGCCAAACT GGAAGGTCTC GACAGTCCCA TGGTCAGCAA CACCGGTAAA
GAGCCGGTGA GAGCCCTACT GTTTGAGTTA CCCTGA
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| Protein sequence | MITLRPANER GQASHGWLDS FHSFSFAEYY DPNHMGFSAL RVINDDTVAP GAGFAPHGHR
DMEILSYVLA GNIRHQDSEG NIATLPAGEF QLMSAGKGIR HSEYNGSQTE ALRFLQIWII
PSTPGGEPGY QQKHFGSREG LTLIASPDGR DESFTVRQDA CVYQLLLSPG QSIALPLGAH
RNGYLHLVEG ALSVEAMEMS PGDGAKLEGL DSPMVSNTGK EPVRALLFEL P
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