| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1378 |
|---|
| Symbol | |
|---|
| ID | 4603630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1669826 |
|---|
| End bp | 1670599 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639780728 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_927255 |
|---|
| Protein GI | 119774515 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0250374 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTT TGATTGAACG TATCGAAGGC AATACCGCCA TCCTCACCAT CAGCAATCCT
CCGGCCAATA CCTGGACCCG TGAGAGCCTG AATGAGCTGA AGGAAAAGGT ACTCGAGCTG
AATGATAACA ATGAGATTTA CGCGCTGGTG TTGACCGGCG AAGGGGAGAA GTTCTTTTCC
GCGGGCGCTG ATTTGAAACT CTTTGCCGAC GGCGACAAGG GCAATGCCGC CACCATGGCC
AAGGCCTTCG GTGAAGCCTT TGAAACCTTG AGCGCCTTCC GTGGCGTGTC CATCGCGGCC
ATCAATGGCT ATGCCATGGG CGGAGGCCTC GAAGTGGCGC TGGCCTGTGA TATCCGTATC
GCCGAAATTC AGGCAGTAAT GGCACTGCCC GAAGCCACAG TGGGCCTCTT GCCCTGCGCC
GGTGGTACCC AAAACCTGAC TGCCCTGGTG GGCGAGGGCT GGGCCAAACG CATGATCCTC
TGTGGTGAGC GTATCGATGC CACCAAGGCG CTGAATCTTG GGCTGGTAGA AGAGGTGGTG
GAGAAGGGCG AGTCCCTGAG TGCCGCCATC GCCCTGGCCG CCAAGGTTGC CAAGCAAAGC
CCATCTGCCG TGGCCGTGTG CAAAAAGCTT ATTCAGAGTG GGCGCAATAT GCCACGCACC
CAGGCACTGC CGCTGGAGCG TGAACTCTTT GTTGGTCTTT TTGATACCGA AGATCAAGCC
GAAGGGGTGA ATGCCTTCCT CGAGAAGCGT GCCGCCCAGT GGAAAAACCG CTGA
|
|---|
| Protein sequence | MAFLIERIEG NTAILTISNP PANTWTRESL NELKEKVLEL NDNNEIYALV LTGEGEKFFS
AGADLKLFAD GDKGNAATMA KAFGEAFETL SAFRGVSIAA INGYAMGGGL EVALACDIRI
AEIQAVMALP EATVGLLPCA GGTQNLTALV GEGWAKRMIL CGERIDATKA LNLGLVEEVV
EKGESLSAAI ALAAKVAKQS PSAVAVCKKL IQSGRNMPRT QALPLERELF VGLFDTEDQA
EGVNAFLEKR AAQWKNR
|
|---|
| |