Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1375 |
Symbol | |
ID | 4603627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1665719 |
End bp | 1666897 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639780725 |
Product | Acetyl-CoA C-acetyltransferase |
Protein accession | YP_927252 |
Protein GI | 119774512 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.692424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0264446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAT CGGATATCGT CATTGTTGCG GCAAAACGCA CCGCCATGGG TGGTTTTCAG GGCAGCCTGT CTGAGGTGCC GTCACCCAAG TTGGCCGCGA CTGCAGTCAA GGCTCTGCTG GATGACACAG GCCTGGATGG CGCCAGGGTT GACGAACTCC TGATGGGCTG CGTGCTGCCT GCAGGTCTTG GCCAGGCGCC AGCCCGTCAG GCTGCACTGG GCGCAGGTTT GCCGCTGTCA GTGGGCGCCA CCACGGTCAA CAAGGTGTGT GGCTCAGGCA TGAAAACCGT GATGCTGGCC CATGACCTCA TCAAAGCAGG CAGCGCCAAG GTGGTGATTG CCGGCGGCAT GGAGAGCATG AGCCAGGCCC CATACCTGCT CGATAAAGCC CGCGGCGGTA TGCGCATGGG CCACGGCAAG GTGCTTGACC ACATGTTCCT CGACGGTCTT GAAGATGCCT ACACCGGCGG CGCCATGGGC ACCTTCGCCC AGAAAACGGC TGACGATTAC GGCCTGACCC GCGAGTCCAT GGACGCATTC GCCTTAAGCT CTCTGGAAAA AGCCAATGCG GCGATCAATT CCGGCGCCTT CGAAGCGGAA ATCGTGCCTG TAACCGTGTC CAGCCGCAAA GGCGATGTGG AAGTGAAAGT TGATGAGCAG CCCGGTAATG CCCGTCCCGA GAAGATTCCG ACGCTGCGCC CGGCCTTTGC CAAAGACGGC ACCATCACTG CCGCCAACTC ATCGTCTATC TCCGACGGTG CAGCTGCGCT GATGCTGATG AGCCGCGATC AGGCCGACGC TCTGGGTCTT AAGGTACTGG CCACCATCAA GGGGCACACT ACCCATGCCC AGGAGCCAGC CATGTTCACC ACAGCCCCAG TGGGAGCCAT GACCAAGCTG CTCTCCAATG TGGGCTGGAG CAAGGACGAG GTTGATCTCT TTGAAATCAA TGAAGCCTTT GCCATGGTGA CCATGCTTGC CATCAGTGAG CTCAAGCTGG ATGCGGCCAG AGTTAACGTG AACGGCGGCG CCTGCGCCCT GGGTCACCCC ATAGGCTGCT CCGGCGCCCG AGTGCTGGTG ACCCTCATCC ATGCGCTCAA GGCCCGAGGC CTGAAGCGCG GCGTGGCCTC TCTGTGTATC GGCGGCGGCG AAGCCACAGC CATGGCCATC GAAGTTTAA
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Protein sequence | MSVSDIVIVA AKRTAMGGFQ GSLSEVPSPK LAATAVKALL DDTGLDGARV DELLMGCVLP AGLGQAPARQ AALGAGLPLS VGATTVNKVC GSGMKTVMLA HDLIKAGSAK VVIAGGMESM SQAPYLLDKA RGGMRMGHGK VLDHMFLDGL EDAYTGGAMG TFAQKTADDY GLTRESMDAF ALSSLEKANA AINSGAFEAE IVPVTVSSRK GDVEVKVDEQ PGNARPEKIP TLRPAFAKDG TITAANSSSI SDGAAALMLM SRDQADALGL KVLATIKGHT THAQEPAMFT TAPVGAMTKL LSNVGWSKDE VDLFEINEAF AMVTMLAISE LKLDAARVNV NGGACALGHP IGCSGARVLV TLIHALKARG LKRGVASLCI GGGEATAMAI EV
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