Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1359 |
Symbol | |
ID | 4603611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1647559 |
End bp | 1649580 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639780709 |
Product | 3-methylcrotonyl-CoA carboxylase alpha subunit |
Protein accession | YP_927236 |
Protein GI | 119774496 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.812437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACA AACTCTTAAT TGCCAATCGC GGCGAAATTG CCTGCCGCGT TATCCGCACC GCCCGCGACA TGGGCATTAA AACCGTGGCC GTCTACTCAG ATGCCGACCG CGACGCCCGC CATGTGGCGC TGGCAGATGA GTCTTTTTAT CTGGGTGAAA GCGCCCCGGC GAGCTCTTAT CTTCGCGGTG AGCTGATTAT CGATATCGCC AAAAAATGCG GCGCCGAGGC CATTCACCCC GGTTACGGCT TTTTGTCGGA AAACGCTGCT TTTGCCCGCG CCTGTGAGGC AAGCGGCATC GCCTTTGTGG GCCCGGGCTC AGACGCCATC GACGCCATGG GCAGCAAAAG CGCCGCCAAG CTGATTATGG AAAAAGCCGG TGTGCCCCTG GTACCCGGTT ACCACGGCGA CGACCAAAGT GATGCCACCC TGCTTGCTGA AGCCAAAAAA ATTGGTTATC CCCTGCTTAT CAAGGCCGCC TACGGTGGTG GCGGCAAGGG CATGCGTATT GTCGAGAGTG AGAGCGAGCT TAAAGCGGCC ATCGACTCGG CCCGCCGCGA GGCCGCCTCA AGCTTTGGCA ACGATAAACT CTTGATGGAG CGTTATCTGC GTCAGCCGCG CCACGTTGAG GTGCAGGTGT TTGCAGACTC ACAGGGCAAC TGCGTGTATC TGTCTGACCG CGACTGCTCT ATTCAGCGCC GCCACCAAAA GGTGGTGGAA GAAGCCCCTG CCCCGGGCCT GCCGGACAGC CTGCGCAAGC AAATGGGTGA AGCTGCCGTT GCCGCTGCCA AGGCCATCGA CTATCGCGGC GCCGGTACCG TGGAGTTCCT GCTTGACGTC GATATGAGCT TCTTCTTTAT GGAGATGAAC ACCCGTCTGC AGGTAGAGCA CCCGGTGACC GAAATGGTCA CTGGTCAGGA TTTGGTGAAA TGGCAGCTGC TGGTTGCTGC GGGTGCCCAG CTGCCACTGG AGCAGCACGA AATCCAAATC CATGGCCACG CCTTTGAGGT GCGGATTTAC GCCGAAGATC CCAATAACGA GTTTTTGCCT GCCAGTGGCA AGCTCACCTT TTTGCGTGAG CCAGAGCCAA GCCGTCATGT GCGCATCGAC TCTGGCGTGC GTGAAAATGA TGTGATTTCA AACTACTACG ACCCCATGAT TGCCAAGCTG ATTGTGTGGG ACGAGTCGCG CCCCCGCGCG CTGGCACGCC TTACCCGCGC CCTTGGCGAT TACCGTGTGG GCGGACTTAA ACACAATATC GAGTTTCTCT CCAACATCGC CGAGCATCCG GCGTTTGCAC AGGCGAACTT TTCCACCGAC TTTATCGGCC GCTATGGTGA TGCGCTGATT GGCGACAGTC GCGACGAAGC AGACACCGCC TTTGTGCTGG CCGTGCTCAC TCAGCTGCGT TTACGTGAGG CTGTGTCTCA GGACGTGGCT GGACACGACC CCTTCAGCCC CTGGTCGAGC CTGAAAGGCT TTCGCCTAAG CAGCCCAAGA CGCCACAGCG TAACCCTGCT GGATGACGCT CACCAAAGCC GCAGCGCAGA GCTCACCGAG TCAAACGGCC GCTATCAGCT GTGCCTTAAC GACAAGCTGA TTGAGCTAAG CGGCAGCATT GAAGACAGCG AGCTTAAGTG CGAAATCAAC GGCCACAAAA TGAAGGTGAC AGTATCGCTG GAAGACGGCG GCCTCACCGT GTTCCTCTCA AGCGGCAGTT ACCACTTCCG TGAAGTGCTC GGCCAGGTGC TGGAAGAAAC CGCGAGCTCA GAAGATAAAC TCAAGGCACC GATGAACGGC ACTGTGGTGA CCCATCTGGT GGCTGCGGGC GATAAAGTCA GCGCCGGTCA GGGTTTGCTC GTGATGGAAG CCATGAAGAT GGAATACACC ATAGAAGCGC CCTTTGATGG GGTGGTGAGC GAGTTCTTCT TTGCCCCCGG CGAGCTGGTG TCGGACGGTA CCTTGCTGCT GGCGCTGGAG ATGGCCGATG CTGCAGCCGA CAGTAAAGAA ACGGAGGCCT GA
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Protein sequence | MFNKLLIANR GEIACRVIRT ARDMGIKTVA VYSDADRDAR HVALADESFY LGESAPASSY LRGELIIDIA KKCGAEAIHP GYGFLSENAA FARACEASGI AFVGPGSDAI DAMGSKSAAK LIMEKAGVPL VPGYHGDDQS DATLLAEAKK IGYPLLIKAA YGGGGKGMRI VESESELKAA IDSARREAAS SFGNDKLLME RYLRQPRHVE VQVFADSQGN CVYLSDRDCS IQRRHQKVVE EAPAPGLPDS LRKQMGEAAV AAAKAIDYRG AGTVEFLLDV DMSFFFMEMN TRLQVEHPVT EMVTGQDLVK WQLLVAAGAQ LPLEQHEIQI HGHAFEVRIY AEDPNNEFLP ASGKLTFLRE PEPSRHVRID SGVRENDVIS NYYDPMIAKL IVWDESRPRA LARLTRALGD YRVGGLKHNI EFLSNIAEHP AFAQANFSTD FIGRYGDALI GDSRDEADTA FVLAVLTQLR LREAVSQDVA GHDPFSPWSS LKGFRLSSPR RHSVTLLDDA HQSRSAELTE SNGRYQLCLN DKLIELSGSI EDSELKCEIN GHKMKVTVSL EDGGLTVFLS SGSYHFREVL GQVLEETASS EDKLKAPMNG TVVTHLVAAG DKVSAGQGLL VMEAMKMEYT IEAPFDGVVS EFFFAPGELV SDGTLLLALE MADAAADSKE TEA
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