| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1357 |
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| Symbol | |
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| ID | 4603609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1645859 |
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| End bp | 1646560 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780707 |
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| Product | 3-oxoacid CoA-transferase |
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| Protein accession | YP_927234 |
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| Protein GI | 119774494 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.697753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAC TCTACAAGGT CGTCGACAGT TACGACCAGG CCCTGGCGGG CCTAACTGAC
AATATGACCA TTATGGTGGG CGGATTTGGC CTGTGCGGTA TTCCGGAAGG CCTGATTAAC
CAGATGGTAA AACTTGGCAC CAAGGGGCTG ACTGCCATTT CCAACAACGC AGGGGTGGAC
GACTTTGGTC TGGGGCTGTT GCTGCAAAAC AAGCAGATCA GCACCATGAT AGCCTCCTAC
GTGGGTGAAA ACGCCACCTT CGAGCGCCAG ATGCTGAGCG GCGAGCTGAA CGTTATCCTC
ACCCCACAGG GCACACTGGC TGAAAAAATC CGTGCCGGCG GCGCCGGTAT CCCGGCTTTC
TTTACCGCCA CTGGCTACGG CACTCCGGTT GCCGAGGGTA AAGAAACCCG CGAAATCAAG
GGTCGCCACT ATGTGCTGGA AGAGTCCCTG ACCGCCGATT TTGCCCTTAT CCGCGCCTGG
AAGGCCGATA CCATGGGTAA CCTGGTGTTC CGTAAAACCG CCGCCAACTT CAACCCCATG
ATGGCCACCG CCGGTAAAAT CACCGTGGTG GAAGTGGAAG AAATTGTTGA GCCGGGCGAG
CTTGACCCGG ACCATATCCA CACCCCGGGC ATTTATGTGG ATCGCATCAT CAAAGGCAGC
TTTGAGAAGC GTATCGAACA GCGCACCGTG AAAAAGGCTT AA
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| Protein sequence | MAGLYKVVDS YDQALAGLTD NMTIMVGGFG LCGIPEGLIN QMVKLGTKGL TAISNNAGVD
DFGLGLLLQN KQISTMIASY VGENATFERQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF
FTATGYGTPV AEGKETREIK GRHYVLEESL TADFALIRAW KADTMGNLVF RKTAANFNPM
MATAGKITVV EVEEIVEPGE LDPDHIHTPG IYVDRIIKGS FEKRIEQRTV KKA
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