| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1320 |
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| Symbol | |
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| ID | 4603572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1604790 |
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| End bp | 1607255 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780670 |
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| Product | Ig-like, group 1 |
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| Protein accession | YP_927197 |
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| Protein GI | 119774457 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00729266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.247272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAG CGTTTAAGTT ATGGTTGGCC ACCTTCCTCT CGTTTTTATT AATAGCCTGC
GGGGGCGGTG GTTCGATTTC AGATACAGGG GGAGGGGATG GTGGTACGCC TCCAACAGAC
ACAATTACGG TCACAGCTGC TATAACATTT AGCTCTTCCA ACAGCACCAT TGGCATAGAT
ACTCCGGCCA CAGTGACAGC AAATGTTAAA GGATCGCTTT CTGGTGCAAA AGCTGGAAAA
TTGGTCACCT TTAAACTGAA TAACGCATCT TTAGGCACTT TTACCCCATC CACAGGAACA
GCCCTGACCG ATGCAGAGGG TAATGCCACT ATTACGCTGA GTACGGCAGA TATTGCCGGA
GCAGGAACAG TCACTGCGAG TGTCGACACC GGTGAGTCCA GCGACCCTGT TGGTTTTACC
ATGAAAGGTG ACGGCGGAAG CTCAACCGGT GGTGAAGCCC AGGTGAGCTT GACGCTTACC
GATGCAGATG GTGCCCCAAC CGATACCATT TCGAGCACCA AGCCCGGCAA GTTGGTTGCC
ACTGTTTCAG GTATTTCCAA GACAGTCATT GTTACATTCA ACTCTTCCCT TGGCGATTTG
CCGATTAAAA CCGCGATTAC AGATGCAAAC GGCAAGGCCA GTGTCGATAT TTATGCAGGC
AGTCAACCTG GTGCTGCCGA GGCTACAGCG ACTCTTTCAA CCGGTGAAAG CGGCCAGAAA
GTGTTTGTGA TTGGCGCCAG CAATGTGCTG ATGGGAACTG CTGAAGGCGA CTTTGTTGCG
GGTAAGGCCT CTGTGAGCGC CAGTGCTATT TCTGCAGGCG GTACTGCGAC GGTTTCTGTC
AAGCTTCAAG ATGACCAGGG TATCCTCTTT ACCGAACCTG TCAGTGTCAG CTTCTCGTCA
ACCTGTGCGA CCAAGGGGCA AGCTGAGCTA AGTAGCCCAA TTACTGCCGT TGGTGGTATC
GCGACCAGCA CTTATTTGGC TAAAGGTTGT GTGGGTGATG ACAATATCAG TGTCTCAGCA
GATGTAGGTG GCAAGAACCT GTCAGCGACT GGCACATTGA ATGTGCTTGC AGCAGATGCT
GGCAGTATTG TCTTTGTCGG AGCAACTCCT GAAAATATCA GTATCAAGGG CACGGGTGGT
GATGAGTCAT CCACTGTGAA GTTCAAGGTA CTAGATACCA ATGGCAACCC GGTGGCCAAC
AAGGCTGTGT CTTTCACGTT AAACACCTCC GTGGGGGGCC TGACGCTAAG CCCAGCCACA
GCCACTACCA ATAGCCAGGG CATTGCCCAA ACAGTGGTAA CTTCCGGTGC AGTGGCAACT
ACGGTGCGAG TTACTGCATC GATTGACGGC ACCAACCCGG TTATTTCGAG CCAATCCAGC
GTGCTGGTGA TTTCTACCGG TAAGCCCGAT CAGGACAGCT TCTCTTTATC TGCCGAAGTA
TTGAATGCTG AAGGCTGGGA TATTGATGGC ACCGAAGTGA AGGTGACAGC GCGTCTTGCG
GATGCCTTTA ACAACCCAGT GCCAGATGGA ACGGCGGTTT ATTTCACCAC TGAAGGTGGT
TCAATAGACC CGTCCTGTAC CACTGCTAAT GGAGCCTGTA CTGTCGTATG GCGCAGTCAA
AATGCCAGGC CTGGCGGCGT GACGCTTATC GACGGTTCGG GCGCCATGGT TCGTAACCCA
ACGCCTGTGT TGGTAGAAGA TGGTGGTCGC TATTACGGCT TCTATGGCCA GAAGTTTGGC
GGCCGCGCAA CCATTACCGC CACCGCTGTA GGTGAAGAGT CCTTCCCTGA TACCAACGGT
AACGGCCGAT TTGATGCTGC GGAAATGGAT GCCTTCTTAA ATGGAACCGA TGTTAGCGGC
GACAGCTACG ATTTGGCTGA TGCCTTTGTC GACCATAACG AAGATGGCAT ATTCAACCCT
CAGCAAGCGG GTGGTCAAAC CGGTGGCGAA AATGAAGAGC TCGTTGATTT TGACGAAGAC
GGGCAATTTG ATGCTGCAGA TAGCAAATAC AATGGCGTGC TGTGCTCAGT GCCTGCCCAT
GCCGGCTGCG CAAGTGTCGA TGCTCAGTCA CTCTTCGTCA GACGCAGTCT GGTGCTGGTG
ATGTCAGGCA GTGAGGCTTT TGCGACTGCA GCAGACGATG TGGTGATTGA CGACCGTGAT
GGTGTGTCAA CCGGCGGCAG CATCGACATT AACGGTAAAT CGACTGCGTC TGTGGTCTTT
GCCATCTCTG ATTTGCACAA TCAGCAGATG CCTGCAGGAA CTAAAGTTCA ATTCGCTACA
TCGACGGGTT CGATTGCCAG TACCGCCAGC TACACCTGGC CCAGCAGTAA CTACAATGGT
GCGAGACAAT TCTCCGTGAC CGTGAAGGGG GCAGACCAAC CTGAGAGCGG CGTGTTCTCT
GTGACTGTTA CCACCCCAGG CGGTACGGCC ACCGAGGTAC TGACAGTCCC TGTAAACATC
TATTGA
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| Protein sequence | MKSAFKLWLA TFLSFLLIAC GGGGSISDTG GGDGGTPPTD TITVTAAITF SSSNSTIGID
TPATVTANVK GSLSGAKAGK LVTFKLNNAS LGTFTPSTGT ALTDAEGNAT ITLSTADIAG
AGTVTASVDT GESSDPVGFT MKGDGGSSTG GEAQVSLTLT DADGAPTDTI SSTKPGKLVA
TVSGISKTVI VTFNSSLGDL PIKTAITDAN GKASVDIYAG SQPGAAEATA TLSTGESGQK
VFVIGASNVL MGTAEGDFVA GKASVSASAI SAGGTATVSV KLQDDQGILF TEPVSVSFSS
TCATKGQAEL SSPITAVGGI ATSTYLAKGC VGDDNISVSA DVGGKNLSAT GTLNVLAADA
GSIVFVGATP ENISIKGTGG DESSTVKFKV LDTNGNPVAN KAVSFTLNTS VGGLTLSPAT
ATTNSQGIAQ TVVTSGAVAT TVRVTASIDG TNPVISSQSS VLVISTGKPD QDSFSLSAEV
LNAEGWDIDG TEVKVTARLA DAFNNPVPDG TAVYFTTEGG SIDPSCTTAN GACTVVWRSQ
NARPGGVTLI DGSGAMVRNP TPVLVEDGGR YYGFYGQKFG GRATITATAV GEESFPDTNG
NGRFDAAEMD AFLNGTDVSG DSYDLADAFV DHNEDGIFNP QQAGGQTGGE NEELVDFDED
GQFDAADSKY NGVLCSVPAH AGCASVDAQS LFVRRSLVLV MSGSEAFATA ADDVVIDDRD
GVSTGGSIDI NGKSTASVVF AISDLHNQQM PAGTKVQFAT STGSIASTAS YTWPSSNYNG
ARQFSVTVKG ADQPESGVFS VTVTTPGGTA TEVLTVPVNI Y
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