Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1313 |
Symbol | |
ID | 4603565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1596151 |
End bp | 1598064 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780663 |
Product | heat shock protein 90 |
Protein accession | YP_927190 |
Protein GI | 119774450 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.145243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.133282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATC AAGAAACCCA TGGTTTTCAA ACAGAAGTCA AACAGCTTTT GCATTTGATG ATCCACTCTT TGTACTCCAA CAAAGAAATC TTTTTGCGTG AACTGGTCTC CAATGCCGCC GACGCCGCTG ACAAGCTGCG TTACCTGGCG CTGACCAACG ACAGCCTGTA TGAGGGTGAC GGTGAGCTGC GGGTACGTGT GAGTGCCGAT AAAGACAAGG GCACAGTGAC CATAGAAGAC AATGGCATTG GTATGACCCG CGATGGCGTT ATCGAACACC TGGGCACCAT CGCCAAATCG GGTACTGCCG AGTTCTTTAA AAACCTCTCC GGCGACAGCG CCAAAGACTC GCAGCTGATT GGTCAGTTCG GTGTGGGTTT CTATTCGGCC TTTATCGTCG CCAAGCGCGT TGAGGTGTTT ACCCGCGCCG CCGGTCATAG CGCCGACGAA GGGGTGAAGT GGGAGTCGGA AGGTGAAGGT AACTTCAGCG TCGAAACCAT CACCAAAGCT GAGCGCGGCA CCAAAATCGT GCTGCACCTG CGTGATGAAG AAAAGGAATT TGCCGATGAC TGGCGCCTGC GTTCCATCAT CACCAAGTAC TCAGATCATA TCTCCATCCC GGTAGAGATG TATCAGGAAG GCACCCCTGA GCGTGACGGT CCCGATGGCG AGAAGATTCC TGCCACCGAA GGTCAGTGGA AGGCTATGAA CAAGGCCACC GCCCTGTGGA CCCGCAGCAA GTCAGACGTG AGCGACGAAG AGTACAAAGA ATTCTACAAG CACATTTCCC ACGACTTTGC TGATCCTCTG GATTGGAGCC ACAACAAGGT TGAAGGTAAT CAGGAATATA CCAGCCTGCT GTATATCCCG GCCAAGGCCC CCTGGGACCT GTGGAACCGT GACCGCAAGC ATGGGCTGAA GCTGTTTGTG CAGCGGGTGT TCATCATGGA TGACGCTGAG CAGTTTATGC CATCTTACCT GCGTTTCGTG CAGGGCTTGA TTGACTCCAA CGACTTGCCG CTGAACGTGA GCCGCGAAAT CCTGCAGGAC AATAAAGTCA CGCGCAATCT GCGTCAGGCA TTGACCAAGC GTGTGCTGTC GATGCTGGAA AAGCTGGCCA AAGACGATGC CGACAAGTAT CAGCAGTTCT GGGCAGAGTT TGGTACCGTG CTCAAAGAAG GTCCGGCGGA AGATTTTGCC AACCGTGAGC GTATTGCCGG TTTGCTGCGT TTTGCCTCAA CCCACACGGG TGATGCGACG CCGTCAGTGT CGCTGGATGA TTACATCGGC CGCATGAAGG AAGGTCAGGA AAAGATTTAC TACATAGTGG CCGACAGCCA CGAGGCCGCG GCCAACAGCC CACACCTGGA GCTGTTGAAG AAGAAGGGCA TCGAAGTGCT GCTGCTGTCT GAGCGCATCG ACGAGTGGCT GATTAACCAC CTGCACGACT ATAAAGAAAA GGCTCTGCAC TCTGTGACCC GCGGCGATCT GGATCTCGGC GCCCTAGAAG ACGAGGCCGA GAAGGCCGCG CAGGAGAAAT TGGCCCAGGA GTCTGAGCCC TTGGTAGAGC GATTCAAGTC TGCTCTGGGT GATAAAGTCA GCGACGTGAA AATCACGACC CGTCTGACCG ATACGCCCGC CTGTGTGGTG ACAGGGGAAG GCGAAATGTC GAGCCAGATG ATCAAGCTGA TGCAGGCCGC TGGTCAACCA GTACCTGAAT CCAAGCCAAC GCTTGAACTT AACCCAACAC ACCCGCTGGT GGCCCGTTTG GATAAGGAGC AGGATGAAAC AGCCTTCGCC GAGTGGGCTG AAATGCTGCT CGCACAGGCG ACCCTGTCTG AGCGTGGCAG CCTGGCAGAC CCATCTGCCT TCATCAAGCT GGTGAACCAG ATGCTGCTTA AATCGGTTGG CTAA
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Protein sequence | MSHQETHGFQ TEVKQLLHLM IHSLYSNKEI FLRELVSNAA DAADKLRYLA LTNDSLYEGD GELRVRVSAD KDKGTVTIED NGIGMTRDGV IEHLGTIAKS GTAEFFKNLS GDSAKDSQLI GQFGVGFYSA FIVAKRVEVF TRAAGHSADE GVKWESEGEG NFSVETITKA ERGTKIVLHL RDEEKEFADD WRLRSIITKY SDHISIPVEM YQEGTPERDG PDGEKIPATE GQWKAMNKAT ALWTRSKSDV SDEEYKEFYK HISHDFADPL DWSHNKVEGN QEYTSLLYIP AKAPWDLWNR DRKHGLKLFV QRVFIMDDAE QFMPSYLRFV QGLIDSNDLP LNVSREILQD NKVTRNLRQA LTKRVLSMLE KLAKDDADKY QQFWAEFGTV LKEGPAEDFA NRERIAGLLR FASTHTGDAT PSVSLDDYIG RMKEGQEKIY YIVADSHEAA ANSPHLELLK KKGIEVLLLS ERIDEWLINH LHDYKEKALH SVTRGDLDLG ALEDEAEKAA QEKLAQESEP LVERFKSALG DKVSDVKITT RLTDTPACVV TGEGEMSSQM IKLMQAAGQP VPESKPTLEL NPTHPLVARL DKEQDETAFA EWAEMLLAQA TLSERGSLAD PSAFIKLVNQ MLLKSVG
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