| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1292 |
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| Symbol | |
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| ID | 4603544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1579364 |
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| End bp | 1579825 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780642 |
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| Product | Rrf2 family protein |
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| Protein accession | YP_927169 |
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| Protein GI | 119774429 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.418655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0132306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGA CATCAAAAGG CCGCTACGCC GTAACTGCTA TGCTGGATGT GGCGATTCAT
TCCGCCCAAG GGCCTGTACC GCTGGCTGAT ATTTCCGAGC GCCAGGGGAT TTCACTCTCT
TACCTCGAGC AACTTTTTGC CAAGTTGCGC AAACATGGAC TGGTCGCCAG TGTCCGCGGC
CCGGGTGGCG GTTATCGCCT CGGGCTTGAA GCGGACGATA TTTCTGTCGG CATGGTTGTC
CATGCTGTTG ACGAATCAGT GGATGCTACC CGCTGTCAGG GTGCTGGTAA CTGTCAAAGT
GGCAGTCGCT GCCTGACCCA TTCTCTGTGG GGCGATCTCA GCAAACAAAT TTCTGACTTT
TTGAACGGTA TCAGCCTCGC TGCACTTATG CAGAAACGGG ATGTTCAGTA CATCTCTGTG
CAGCAGGATC AGATACAGAA AGGGCACAGG GCATCGGCTT AA
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| Protein sequence | MKLTSKGRYA VTAMLDVAIH SAQGPVPLAD ISERQGISLS YLEQLFAKLR KHGLVASVRG
PGGGYRLGLE ADDISVGMVV HAVDESVDAT RCQGAGNCQS GSRCLTHSLW GDLSKQISDF
LNGISLAALM QKRDVQYISV QQDQIQKGHR ASA
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