Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1275 |
Symbol | |
ID | 4603527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1563748 |
End bp | 1565865 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780625 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_927152 |
Protein GI | 119774412 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00198508 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGTGG TTATCAAGCG GGATGGTTGC CGCGCTGCCT TTGATGAAAC CCGGTTGCGG GATGCTGTTA TTGCAGCCCA GGGCGCAGCC GGTGTCGAGG ATAAAGACTA TGCGGCCACG GTGGCGTCGG TGGTGGCAGC CGAGGTGGCC CAGCGCGACG AAGTTGCTAT CCACGAGCTG CAGGATGCAG TGGAAAACTG CCTGATGTCC GGTCCCTATA AAGAGGTTGC CCGTCACTAT ATCGAATATC GCCACGACAG AGACGTATGC CGCGAAGCAA CCAGTCGACT GAATCTGGAA ATCCGTTCGC TGGTGGAGCA AACCAATGCG GCGTTGCTGC ATGAAAACGC CAATAAAGAC TCCAAGGTGA TCCCGACCCA ACGTGACTTG CTCGCCGGCA TTGTCGCCCG TCACTATGCC AAGCGCCACA TTTTGCCCAA GGCGGTGGTG GCAGCCCATG AGGCGGGGGA GATACATTAT CACGATCTGG ATTACTCACC CTTTTTCCCT ATGTTCAACT GCATGCTGAT TGACCTTGCT GGCATGTTGA CCAAGGGCTT TAAAATGGGC AACGCCGAAA TCGAAACGCC CAAGTCTATT TCCACCGCGA CTGCTGTGAC AGCGCAGATC ATCGCCCAGG TGGCCAGCCA CATCTATGGC GGTACCACCA TCAATCGCAT CGATGAAGTG TTGTCACCCT ATGTGGCCAA GAGCTATGAC AAACACTACC AAACGGCGCT GCACTGGGGC ATTACCGATG CGGTGGCCTA TGCCCGTGCC CTGACAGAAA AAGAGTGTCA CGATGCTTTC CAGTCGCTGG AATACGAAGT GAACACCCTG CATACGGCTA ACGGACAGAC CCCATTTGTC ACCTTTGGCT TTGGTCTTGG CACCAGTTGG GAGTCGCGGC TGATTCAGCA GTCCATTCTT AAGGTGCGGA TGGCGGGACT GGGTAAAAAC CGCAAAACAG CAGTATTCCC CAAACTGGTG TTTGCCATCC GCGATGGCAT CAATCACAAG CAGGGTGACT GCAACTACGA TATCAAGCGT CTGGCACTCA AGTGCGCCAC CGAGCGCATG TATCCGGACA TTCTCAACTA CGAGCAAGTG GTGCGTGTCA CCGGGTCATT CAAAACCCCC ATGGGCTGTC GCAGCTTCCT TGGGGTGTAT GAAAAAGACG GTGAGTTGGA GCACGAAGGC CGTAATAACC TGGGGGTGGT CAGTCTTAAC CTGCCACGTA TCGCCATTGA AGCCGGTGGC GATGAAAGTC GCTTCTACAG CTTGCTGGAG GAGCGTTTGC AGGTGGCACG ACAGGCCCTC GATAGCCGCA TTGAACGCCT GAAAGGGGTG AAGGCCCGGG TTGCGCCGAT TCTGTACATG GAAGGAGCAT GCGGCGTTCG ACTGCGCCCG GACGATGATA TTGAGCCCAT ATTCAAAAAT GGTCGTGCGT CCATCTCCCT TGGCTACATA GGCCTGCATG AAACCGTAAA CGCCCTTTAT GGTACGCAGG AGCATGTGTA CGACTCCGAG GAGCTTCGGC AAAAAGCCGT TGCCATCGTG GCGCGCCTCA AGCAGGCCAC CGAGCAATGG AAGCAGGAAA CCGGGTACGG TTTCAGCCTG TACAGTACAC CCAGCGAAAG CCTGTGCAGC CGCTTTGCCA AGTTGGATAT CAAGGCCTTT GGCCTGATAC AAGGGGTGAC TGACAAGGGC TACTACACCA ACAGTTTCCA CCTGGATGTG GAAAAGAAAG TCTCGCCATT TGATAAAATC GATTTTGAGA TGCCATACCC AGAGCTCGCC AGTGGTGGCT TTATTTGCTA CGGCGAATAT CCCAATATGC AGCACAATAT TGATGCACTG GAGGACGTGT GGGACTACAG CTATACCCGG GTCCCTTACT ATGGCACCAA TACCCCCATC GATGAGTGCT ACGACTGTGG CTTTACCGGC GAATTTGACT GCACCAGCAA GGGCTTTGTA TGCCCGGTTT GCGGAAACCA TGAGCCCAGT CGTGTGTCAG TAACACGCAG GGTGTGTGGC TATCTTGGCA GCCCTGATGC GCGTCCCTTT AATCATGGCA AGCAGGAAGA AGTCAAACGC CGGGTCAAGC ATCTCTGA
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Protein sequence | MPVVIKRDGC RAAFDETRLR DAVIAAQGAA GVEDKDYAAT VASVVAAEVA QRDEVAIHEL QDAVENCLMS GPYKEVARHY IEYRHDRDVC REATSRLNLE IRSLVEQTNA ALLHENANKD SKVIPTQRDL LAGIVARHYA KRHILPKAVV AAHEAGEIHY HDLDYSPFFP MFNCMLIDLA GMLTKGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LSPYVAKSYD KHYQTALHWG ITDAVAYARA LTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW ESRLIQQSIL KVRMAGLGKN RKTAVFPKLV FAIRDGINHK QGDCNYDIKR LALKCATERM YPDILNYEQV VRVTGSFKTP MGCRSFLGVY EKDGELEHEG RNNLGVVSLN LPRIAIEAGG DESRFYSLLE ERLQVARQAL DSRIERLKGV KARVAPILYM EGACGVRLRP DDDIEPIFKN GRASISLGYI GLHETVNALY GTQEHVYDSE ELRQKAVAIV ARLKQATEQW KQETGYGFSL YSTPSESLCS RFAKLDIKAF GLIQGVTDKG YYTNSFHLDV EKKVSPFDKI DFEMPYPELA SGGFICYGEY PNMQHNIDAL EDVWDYSYTR VPYYGTNTPI DECYDCGFTG EFDCTSKGFV CPVCGNHEPS RVSVTRRVCG YLGSPDARPF NHGKQEEVKR RVKHL
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