| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1255 |
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| Symbol | |
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| ID | 4603507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1543477 |
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| End bp | 1544832 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780605 |
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| Product | MotA/TolQ/ExbB proton channel family protein |
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| Protein accession | YP_927132 |
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| Protein GI | 119774392 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.429171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000153929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGAAGT TAATTTCTAC CGCCGTTGTT GCGGCCAGTC TGTCACTCAC TGCCGGTATG
GTTAGTGCTG CTGACGCGCC AAAGACTATT GATCAACTGC TTCAGCAAGT TAAAACTGAG
CGTACCGCTG AAGGTAAAGT AAATGCCAAG CGCGAAGCTG AGTTCAAAGC TGAGCGTGGT
GACAAAGCTT CTCTGCTGCA ACGTGAAAAA TCTGCTCTGG CTGCCGAAAA GCAGCGTGGC
CAAGACCTGA ACCAGGCCTT CATCGACAAC GAGCGTAAAA TCGCTCAGCT CGAAGAAGAC
CTGAAAACCG CTCAGGGTGA CCTGGGTGAA ATGTTTGGTG TGGTTAAAGG TGAAGCCGGT
GATTTCGCTG GTAAGCTGGT AGGCTCTAAC GTATCTGCTC AGTACCCTAA GCGTGACGTG
TTCATCGCTG ATCTGGGTTC TCGCAAGCAG CTGCCAAAAA TCGAAGAACT GGAAAAGTTC
TGGCAAGAAC AGCTGTTCGA AATGGCTGAG TCTGGCAAAG TGGTTAAGTT TGAAGCTGCT
GTAACCGACA TCGACGGTAA CGTAGTTAAC ACCACTGTTC ACCGTATCGG TTCTTTCAAC
CTGACTGCCG ATGGCAAGTA TGTGGTATAC AACCCAGAAC TGGGTCTGAT CCAACAGCTG
TCTGCTCAGC CAGAAGGTTA CCAGGTTGCG CCAATCGCTA AGTGGGAAGC CACTACCAGC
GGTGCCGCCA AACTGTACAT CGACCCAGCT CGCGGTACTC TGCTGAACAT CTTCACCCAG
AAAGCATCTT TCCAAGATCG TATCGAAGCC GGTGGCGTGA TTGGTTACAT CATCATCGGT
CTGCTGGCCT TGGGTCTGCT GATTGGTCTT GAGCGTCTGC TGACTCTGTT CGTGATTGGT
TCTAAAGTTA AATCTCAGGC CAAGAACGTA GCTAACCCAG GCAACAACGC ACTGGGCCGT
ATCCTGAAAG TGTATCAGGA CAACAAAGAT GCCGACGTTG AAACTCTGGA ACTGAAACTG
GATGAAGCCA TCCTGAAAGA AACTCCAGCT ATCGAGACTC GTATCTCTAT CATCAAAGTA
CTGGCCGCTA TCGCTCCTAT GATGGGTCTG CTGGGTACCG TAACCGGTAT GATTGCAACC
TTCCAGAGCA TCCAGCTGTT CGGTACTGGC GATCCAAAAC TGATGGCCGG CGGTATTTCT
ATGGCACTGG TAACTACTGT TCAAGGTCTG GTTGCTGCTC TGCCTCTGAT GCTGGTTCAC
GCTATCGTTG TGGCTCGCAG TAAGACCATC GTTCAAACTC TGGAAGAACA GAGTGCAGGT
ATCATTGCTG AACACGCTGA GAAGAGGGCT AACTAA
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| Protein sequence | MKKLISTAVV AASLSLTAGM VSAADAPKTI DQLLQQVKTE RTAEGKVNAK REAEFKAERG
DKASLLQREK SALAAEKQRG QDLNQAFIDN ERKIAQLEED LKTAQGDLGE MFGVVKGEAG
DFAGKLVGSN VSAQYPKRDV FIADLGSRKQ LPKIEELEKF WQEQLFEMAE SGKVVKFEAA
VTDIDGNVVN TTVHRIGSFN LTADGKYVVY NPELGLIQQL SAQPEGYQVA PIAKWEATTS
GAAKLYIDPA RGTLLNIFTQ KASFQDRIEA GGVIGYIIIG LLALGLLIGL ERLLTLFVIG
SKVKSQAKNV ANPGNNALGR ILKVYQDNKD ADVETLELKL DEAILKETPA IETRISIIKV
LAAIAPMMGL LGTVTGMIAT FQSIQLFGTG DPKLMAGGIS MALVTTVQGL VAALPLMLVH
AIVVARSKTI VQTLEEQSAG IIAEHAEKRA N
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