| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1251 |
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| Symbol | |
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| ID | 4603503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1536292 |
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| End bp | 1537500 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639780601 |
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| Product | outer membrane porin, putative |
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| Protein accession | YP_927128 |
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| Protein GI | 119774388 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000429036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000137517 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAGA CTCTCATCGC CGGCGCAATA TTGGCCTCGC TGGTGGCTCC CACCGTTTCT
GCCATCGAAA TTTACAAAGA CGACAAAAAC GCCGTCTCCA TCGGTGGTTT TATCGACGCC
CGCGCAATTC ATACCCAGGA CACCACAGAA GTGGTAAACG GTGCCTCTCG TATTAATTTT
GGCTTTGAGC GTGCCCTCAG CCACGACTGG AAAGCCTTTG CCCTGCTCGA GTGGGGGATC
AATCCCTTCG GCAGCAGTGA GATTGTTTAT AACAACAAAT TCGAAACCGT ACAGGACGAG
TTCTTTTACA ACCGTCTTGG TTATGCCGGT CTGAGCCATG ACACCTGGGG TACCCTCACC
ATCGGTAAAC AGTGGGGCGC ATGGTATGAC GTGGTCTACG GCACCAACTA CGGCTTTGTG
TGGGATGGAA ACGCCGCGGG CGTTTATACC TACAACAAAG ATGATGGTGC AGTAAATGGC
ACCGGCCGCG GTGATAAAGT CATCCAATAT CGTAACAGCG TGGGTGACTT CAGCTATGCC
ATCCAGGCTC AGTTAAAAAA CAGCACTTTC TTCACCTGCG ACTTCGACGA TATCACTCAA
GATGACTGCC AAGCCTTGTG GCAGCAGGGC AAGCGCGAAG CCCAGCAGGT TGAATATAAC
TACACCTACG GCGGCGCAGT TACCTGGAAG GCAACTGACA AATTGGCATT GGCGGTGGGC
GTAAACCGCG GTGAATTTGA TGTGACCTAT GGTAACGGCG ACCAAATTAC TGCGGTTGAT
CTGATCTACG GCGTGGGCGC GACCTGGGGT GATTTTGACA CAGATGGTTT TTATGCCTCT
CTTAATTACA ACTACAACGA AAACCACGAT ACAGACAACA TAGGTCGCTT GATTAAAGAG
GCCTTTGGTA TCGAGTCACT GTTCTCCTAC AAATTTGAGA ATGGTTTCCG CGCATTTGTA
TCTTATAACT TGCTGGACGC CGGTAACGAC TACGTTATCC AACCAAACTT TAATGCCGAC
CCCAACGACG TATTCAAACG TCAATTTGTG GTAGCGGGTT TACATTATGT TTGGGATAAA
GACACAGTGC TGTATGTGGA AGGACGTAAA GACTTCAGTG ATTTCAGCAG TGCCGATGTC
GAACAGGAAG CGAGAATGGC GCTTTCGGAA GATGACGGTA TCGCAATAGG CATTCGTTAC
ACATTGTAA
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| Protein sequence | MNKTLIAGAI LASLVAPTVS AIEIYKDDKN AVSIGGFIDA RAIHTQDTTE VVNGASRINF
GFERALSHDW KAFALLEWGI NPFGSSEIVY NNKFETVQDE FFYNRLGYAG LSHDTWGTLT
IGKQWGAWYD VVYGTNYGFV WDGNAAGVYT YNKDDGAVNG TGRGDKVIQY RNSVGDFSYA
IQAQLKNSTF FTCDFDDITQ DDCQALWQQG KREAQQVEYN YTYGGAVTWK ATDKLALAVG
VNRGEFDVTY GNGDQITAVD LIYGVGATWG DFDTDGFYAS LNYNYNENHD TDNIGRLIKE
AFGIESLFSY KFENGFRAFV SYNLLDAGND YVIQPNFNAD PNDVFKRQFV VAGLHYVWDK
DTVLYVEGRK DFSDFSSADV EQEARMALSE DDGIAIGIRY TL
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