| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1231 |
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| Symbol | |
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| ID | 4603483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1515577 |
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| End bp | 1516362 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780581 |
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| Product | peptide ABC transporter, ATP-binding protein |
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| Protein accession | YP_927108 |
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| Protein GI | 119774368 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CGCTGCTTAA GGTCACCAGT CTGTCAAAAC GCTACTTCAC CGGCTATCAC
AGGTTTAAGC GCCAGTATAA CGAGGCCTTG GCGCCCATTT CGTTTGAACT CGGCCGTGGT
GAGACACTGG CCATTGTAGG TGAGGCTGGC TCAGGCAAGA GTACCCTTGC ACGAATATTG
GTGGGCGCGG AGCAGCGCTC CAGCGGTGAT ATCCAGTTTG AAGGCGAATC GCTGGAGAGT
CGCAACTTAA AACAGCGTTG CCGCCTTATC CGGATGATAT TTCAGGACCC CAACACCTCG
CTCAACCCGC GCCTGTCTAT TGGTGAGCTG CTCGAAGAGC CGCTGAGGTT CAATACCGGC
ATGTCGGCAC ATGAGCGCAG TGTTCAGGTC ACCGAAACCC TGCGCAAAGT TGGACTCTTG
CCTGAGCATG CCGATTTTTA TCCGCACATG ATTTCTGAAG GCCAAAAGCA GCGGGTGGCC
GTGGCACGGG CGCTGATGCT AAGCCCAAAG GTGATTATTG CCGACGAGGC ATTGACCGCA
CTGGACCTCT CCGTTCGCTC ACAGATTCTC AATCTGCTGT TACACCTGCA AAAGGAAATG
GGCCTGTCTT ACATCTTCGT GTCCCATAAC CTTAACCTGG TACGCCATGT GAGCGATAAA
ATCATGGTAC TGCACAAGGG CCAGTTGATT GAAAAGGGGC CGGTGCAAAA GGTTTTTGAA
AGCCCTGAGC ATGAGTACAC CGCCAGGCTG ATTGCCGAGC AAACCCGGCA GGTGAGAAAG
CGCTGA
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| Protein sequence | MTTPLLKVTS LSKRYFTGYH RFKRQYNEAL APISFELGRG ETLAIVGEAG SGKSTLARIL
VGAEQRSSGD IQFEGESLES RNLKQRCRLI RMIFQDPNTS LNPRLSIGEL LEEPLRFNTG
MSAHERSVQV TETLRKVGLL PEHADFYPHM ISEGQKQRVA VARALMLSPK VIIADEALTA
LDLSVRSQIL NLLLHLQKEM GLSYIFVSHN LNLVRHVSDK IMVLHKGQLI EKGPVQKVFE
SPEHEYTARL IAEQTRQVRK R
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