| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1226 |
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| Symbol | |
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| ID | 4603478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1508471 |
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| End bp | 1510828 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780576 |
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| Product | endopeptidase La |
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| Protein accession | YP_927103 |
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| Protein GI | 119774363 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000223975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG AGCGTGAAGC GCATTTCGAA TTGCCGGTAT TACCCCTGCG AGATGTGGTG
GTGTACCCCC ATATGGTCAT TCCGTTATTT GTGGGTCGTG AAAAGTCTAT TCGCTGCCTG
GAAACGGCCA TGGCCCAAGA TAAGCAGATC ATGCTTGTCG CTCAGCGAGA TGCCGATCTG
GATGAGCCCG GTGCTGACGA CATTTTTGAG GTGGGGACCA TCGCCTCCAT TCTGCAGCTG
CTCAAACTGC CTGACGGCAC AGTTAAAGTG CTGGTTGAGG GGGGGCGCCG TGCCCGCGTT
GCCCGTTACA CCCAGGAAGA GCCTTTCTTC ATCGGCCGCA TCGAAGAGCT GCCTTCGGCG
CCGTTGGAAG ACAAGGAAGA AGAGGTGTTG GTGCGCAGTG CCATCGCCCA GTTTGAAGGC
TACATCAAGC TCAATAAAAA AATTCCACCC GAAGTGCTCA CCTCCATGTC CGGCATCGAC
GAGGCTGCTC GCCTTGCCGA TACCATGGCG GCCCATATGC CACTCAAGCT CGAAGACAAA
CAGTCTGTGC TTGAAATGGT GAATGTGGGT GAGCGCCTCG AGTACCTGAT GGCCATGATG
GAAGGCGAAA TCGATTTGTT GCAGGTGGAG AAGCGCATCC GCTCCCGCGT GAAAAAGCAA
ATGGAAAAGA GCCAACGCGA GTACTACCTG AATGAGCAAA TGAAAGCCAT TCAGAAGGAG
CTTGGCGATC TTGATGAAGG CCATGATGAA TTTGAGACTC TCAATCGTAA GATTGAAGAG
GCCAAGATGC CGGCTGACGC CAAAGACAAG GCCCAGGCTG AGCTGAACAA GTTACGTATG
ATGTCTCCCA TGTCAGCAGA GGCCACTGTG GTGCGCTCCT ATGTTGATTG GATGACTTCA
GTGCCTTGGT TTGAGCGCTC CAAAATCAAG CGTGACCTCT CCAAGGCCGA GCAGGTACTT
AATGCAGACC ACTATGGTCT GGAAAAAGTC AAAGAGCGTA TCCTTGAGTA TTTGGCGGTT
CAGACCCGGG TGAAACAGCT TAAAGGCCCA ATCCTGTGTC TGGTAGGCCC ACCAGGTGTG
GGTAAAACCT CGCTCGGTCA GTCAATTGCC AAGGCAACCG GCCGTAAATA TGTGCGGGTG
GCGCTCGGTG GTGTGCGCGA TGAAGCGGAA ATCCGCGGCC ATCGCCGTAC TTACATCGGC
TCTATGCCGG GCAAAATCAT TCAGAAGATG GCCAAGGTTG GGGTGAAAAA CCCGCTGTTC
CTGTTGGATG AAATCGACAA GATGAGTTCC GACATGCGCG GCGACCCGGC TTCAGCCCTG
CTGGAAGTTT TGGACCCAGA GCAGAACGCC ACCTTTAACG ATCACTATCT GGAAGTCGAT
TATGACCTGT CCGATGTGAT GTTTGTGGCC ACCAGTAACT CCATGGATAT TCCAGGCCCG
CTGTTGGACC GTATGGAAGT GATTCGTCTG TCGGGTTACA CCGAAGACGA AAAGCTCAAC
ATCGCCAAGC AGCACTTACT GCCAAAGCAG GTAGAGCGCA ACGGCCTTAA GCCACAGGAA
ATCAGCGTCG ATGATGGTGC AATTCTCGGC ATTATCCGTT ACTACACCCG TGAGGCAGGC
GTCCGTGCCC TTGAGCGTGA GCTGTCGAAG ATTTGCCGTA AAGTCGTGAA GCAAATACTG
CTGGATAAAG CGGTGAAACA CGTGGATGTG ACAGGTGAAA ACCTTAAATC ATTCCTGGGT
GTCCAGCGTC ATGACTATGG TAAGGCTGAG TCCAACAATC AGGTAGGTCA GGTAACAGGT
CTTGCCTGGA CTCAGGTTGG CGGCGATCTC CTGACCATTG AAGCCACTTC CGTGGCGGGT
AAGGGCAAGC TGACATACAC GGGCTCTCTG GGTGATGTGA TGCAGGAGTC GATTCAGGCC
GCGATGACAG TGGTTCGGGC GCGCGCCGAG CAGCTGGGTA TCAACCCTGA CTTCTATGAA
AAGCGCGATA TCCATGTGCA CGTGCCTGAA GGTGCGACGC CAAAGGATGG TCCATCAGCC
GGTGCCGCCA TGTGTACCGC ACTGGTTTCA ACCTTAACGG GTAATCCTGT TCGCGCTGAC
GTGGCCATGA CAGGTGAGAT TACTTTGCGC GGTGAAGTGC TGCCCATCGG TGGTCTCAAG
GAGAAACTGC TGGCGGCTCA CCGTGGTGGC ATCAAGCATG TGCTTATCCC CAAGGAAAAC
GAACGTGACC TTGAAGAAAT CCCCGCTAAC GTGGTGGCAG ATCTGCAAAT TCACCCGGTT
CGTTGGGTGG ACGAAGTGCT GAAATTGGCG CTGGAGCGCC CGGTTGAAGG CTTCGAAGTG
GTCAAAAACG CCGGATAA
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| Protein sequence | MSQEREAHFE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL ETAMAQDKQI MLVAQRDADL
DEPGADDIFE VGTIASILQL LKLPDGTVKV LVEGGRRARV ARYTQEEPFF IGRIEELPSA
PLEDKEEEVL VRSAIAQFEG YIKLNKKIPP EVLTSMSGID EAARLADTMA AHMPLKLEDK
QSVLEMVNVG ERLEYLMAMM EGEIDLLQVE KRIRSRVKKQ MEKSQREYYL NEQMKAIQKE
LGDLDEGHDE FETLNRKIEE AKMPADAKDK AQAELNKLRM MSPMSAEATV VRSYVDWMTS
VPWFERSKIK RDLSKAEQVL NADHYGLEKV KERILEYLAV QTRVKQLKGP ILCLVGPPGV
GKTSLGQSIA KATGRKYVRV ALGGVRDEAE IRGHRRTYIG SMPGKIIQKM AKVGVKNPLF
LLDEIDKMSS DMRGDPASAL LEVLDPEQNA TFNDHYLEVD YDLSDVMFVA TSNSMDIPGP
LLDRMEVIRL SGYTEDEKLN IAKQHLLPKQ VERNGLKPQE ISVDDGAILG IIRYYTREAG
VRALERELSK ICRKVVKQIL LDKAVKHVDV TGENLKSFLG VQRHDYGKAE SNNQVGQVTG
LAWTQVGGDL LTIEATSVAG KGKLTYTGSL GDVMQESIQA AMTVVRARAE QLGINPDFYE
KRDIHVHVPE GATPKDGPSA GAAMCTALVS TLTGNPVRAD VAMTGEITLR GEVLPIGGLK
EKLLAAHRGG IKHVLIPKEN ERDLEEIPAN VVADLQIHPV RWVDEVLKLA LERPVEGFEV
VKNAG
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