Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1219 |
Symbol | |
ID | 4603471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1500472 |
End bp | 1501188 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639780566 |
Product | UDP-2,3-diacylglucosamine hydrolase |
Protein accession | YP_927096 |
Protein GI | 119774356 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0158415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCC TCTTTATCGG CGATCTGCAT TTGAGTGCAG ATCGCCCCGA TATTACCTCG GCCTTTCGTC GCTTTCTCTC ACAGTCCTTC GATGATGTGG ATGCCCTGTA TATTCTGGGT GATCTGTTTG AAGTGTGGGT GGGTGATGAT ATTGCGGAGC CCTTCGCACT GGATATCGCG GCCGATATTG CTGCGCTCAG CCACAAGCTG CCAATTTATT TCATTCACGG AAACCGTGAT TTCTTAATTG GGAAGCAGTT TGCAGCTATC AGTAAGATGC AGCTACTTGA TGAAGTGCAT CAAATCAACC TCTACGGCAT TCCCACGCTG CTGCTTCACG GCGACAGCCT CTGCACCCTC GACAAGGGTT ACCAGCGCTT TCGCTGGTTC AGAAACCAGC CCTGGGTGAA GTGGATTTAC AGCAAGTTAT CCCAAAGTAA GCGATTGAGC ATCGCCGCTA ATCTCAGGGC CAAAAGCAAG GCTGGCAATC AGCTGAAGAG TCAGTACATC ATGGATGCCG AACCCCATGC GGTTGCAGAC CTGTTGCAAA AGCACAGCTG CAGGCAAATG ATCCACGGCC ATACTCACAG ACCGGCCATA CACCATGAAA GTGCCGGTAC CCGTATTGTC GTGGGAGACT GGTACAGCCA AAGCAGCGTA TTGGAAATGA CTGCCGAAGG ACCCAACCTT CAGGCTAAGC CCCTTGGCGG CAGCTGA
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Protein sequence | MRTLFIGDLH LSADRPDITS AFRRFLSQSF DDVDALYILG DLFEVWVGDD IAEPFALDIA ADIAALSHKL PIYFIHGNRD FLIGKQFAAI SKMQLLDEVH QINLYGIPTL LLHGDSLCTL DKGYQRFRWF RNQPWVKWIY SKLSQSKRLS IAANLRAKSK AGNQLKSQYI MDAEPHAVAD LLQKHSCRQM IHGHTHRPAI HHESAGTRIV VGDWYSQSSV LEMTAEGPNL QAKPLGGS
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