| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1201 |
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| Symbol | |
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| ID | 4603453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1473553 |
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| End bp | 1475010 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780548 |
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| Product | peptidase M4, thermolysin |
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| Protein accession | YP_927078 |
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| Protein GI | 119774338 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.913619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT ACACTTTAAT CCCTGCAACA CTGGCTCTGT GTGTTTCCGG CGCACTGCAG
GCTGGTAATA CCCTGGAACA CCGCATGGGC CTGGCCCATG GCAACAGCTT TACTGCCGGT
AAATCTTTCA CTACTGCTGC TGGTCACCAA AAAGTTAAGC AACAGCAACT GTTCAATGGT
GTAAAGGTGT ACGGCCACCA CCTGGTCGTG TCCTCTGATG GTGATATTTT TGGTCAGGCC
GCCGCTATTG AGGCCGACTT TAACGTTACC CCAGCCTTGA CCCGTGGCCA GGCGATTGCT
GCGCTGAACA AAGTGTATCC CGGCGCCGTG GCATCAGGCC ATAAAGACGT AGAGCTGGTG
ATTCTGGCGG AAGGGGATGC CCCACGTCTG GCTTACCGCG TGTCTTTCCT CAGCGAAGGT
GTAAACGAGA TTTCCCGTCC CGCCGGTTTG GTGGATGCCA TGACCGGTGA GGTGGTGCGT
CACTGGAACG AGTTGATGAC CGCCAAAAAC AGCGCAGGCA AGCCGGGCAA CGGCGGTGGC
ACGACTCCAG GCACTGCATT TGATGCCACA GGTCCGGGCG GCAATGCCAA AACCGGCCAG
TACTACTACG GCAGTGACTT CGGCCCGCTG AACGTTGAAG AGGCCAACGG CGTATGTACC
ATGAACAACG CCAACGTGAA GACAGTGGAC ATGGCCAACA GTACTCGCCG TGGCAGTGTT
TACTCTTTCA CCTGTCCTGA AAACACCTAT CGTGCCATCA ATGGCGCATA CTCTCCGCTG
AACGATGCTC ACTACTTTGG CGGCGTGATT TTCAACATGT ACAAAGACTG GTACAACACA
GCCCCGCTGA CCTTCCAGCT GGAAATGCGT GTTCACTATG GCCGTAACTA CGAAAACGCC
TTCTGGGATG GCCGTGCCAT GTCCTTCGGT GACGGCGCCA GCTATTTCTA TCCTCTGGTG
AGTTTGGATG TTTCAGCTCA CGAAGTGAGC CACGGCTTCA CCGAACAGAA CTCAGGCCTG
GAATACAGTG CTCAGTCCGG TGGTATGAAC GAAGCTTTCT CCGATATGGC CGGTGAAGCT
GCCGAATTCT TTATGCGTGG CAGCAACGAC TGGATGGTGG GTCATGACAT CTTCAAAGGT
AATGGAGCCC TGCGTTACAT GGACGACCCA ACCAAAGATG GTCGCTCAAT TGGTCATGCC
TCAGATTACA CCAGTGGTAT GGACGTGCAC TATTCTTCCG GTGTGTACAA TAAGGCTTTC
TACCTGCTGG CCAAGAAAAA TGGCTGGGAT ACCCGTAAAG CCTTCGAAGT GTTTGTTCTG
GCAAACCAGC ATTACTGGAC AGCGACCAGC AATTACAATC AGGGCGCCTG TGGTGTAGAG
GCGGCCGCTT CCGATAAGGG TTATGCAGTG TCTGATGTGA CCGCCGCCTT TGCGTCGGTT
GGCGTAAGCT GCCAGTAA
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| Protein sequence | MKAYTLIPAT LALCVSGALQ AGNTLEHRMG LAHGNSFTAG KSFTTAAGHQ KVKQQQLFNG
VKVYGHHLVV SSDGDIFGQA AAIEADFNVT PALTRGQAIA ALNKVYPGAV ASGHKDVELV
ILAEGDAPRL AYRVSFLSEG VNEISRPAGL VDAMTGEVVR HWNELMTAKN SAGKPGNGGG
TTPGTAFDAT GPGGNAKTGQ YYYGSDFGPL NVEEANGVCT MNNANVKTVD MANSTRRGSV
YSFTCPENTY RAINGAYSPL NDAHYFGGVI FNMYKDWYNT APLTFQLEMR VHYGRNYENA
FWDGRAMSFG DGASYFYPLV SLDVSAHEVS HGFTEQNSGL EYSAQSGGMN EAFSDMAGEA
AEFFMRGSND WMVGHDIFKG NGALRYMDDP TKDGRSIGHA SDYTSGMDVH YSSGVYNKAF
YLLAKKNGWD TRKAFEVFVL ANQHYWTATS NYNQGACGVE AAASDKGYAV SDVTAAFASV
GVSCQ
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