| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1193 |
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| Symbol | |
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| ID | 4603445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1462777 |
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| End bp | 1463559 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780540 |
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| Product | GlpR family transcriptional regulator |
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| Protein accession | YP_927070 |
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| Protein GI | 119774330 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.604361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATTC TCAACACCAT AGAGAGACAA CAGGAAATCG TGCGCCTGAC CCAACAACAG
GGAAAGGTGT CGGTAAGCGA TTTGTCGGCA CGCTTCGGAG TGTCAGAGGT CACCATTCGC
AGTGACCTGG CAACCCTGGA TCAAAAGCAG TTGCTGGTGC GCTCCCGTGG CGGTGCCATC
GTGAATACCG AGCTGAGCCG CGAGTTGTCC CTGAAGGAAA AAGGCAGTTG CTATTCGGCC
CTGAAACGGG AACTCGGCGC GGCGGCCGCA AGTCTGGTGC AAAACGGGGA CCGACTGCTG
CTCGACTCGG GTACCACCAC AGAGCAAGTT GCCCATCATC TGATGCAGCA CGAAGACCTT
ATCGTGATGA CCAATGGACT GAACATAGCC TCTGTGCTGT CCAAGTCAGA CTCGGTGGAA
GTGATGCTGA CCGGTGGCCT GCTGCGTAAA AAGTCCATGT CCTTTTACGG CAGCGCTGCC
GAGAAGAGCC TGGGTGACTA CAACTTCAAC AAACTGATTC TTGGTGTGGA CGGTTTCGAC
TTGAAGGCCG GACTGACCAC CCATTTTGAA AAAGAAGCCT GTCTGAACCG GATGATGGTG
GACATTGCCA CTGAGGTCAT AGTGGTGACC GACTCATCCA AATTTGATCA GCAGGCCTTT
CATGTGATCT GTCCTTTGCT TCGCATTCAC AGGCTGGTCA CTGACACAGG CATTCCTGAG
CGTTACGCCC AGGCACTCGA AAAACAAGGG GTGCAATTGC ACCTGGTAGA ACGCACTCAA
TAG
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| Protein sequence | MNILNTIERQ QEIVRLTQQQ GKVSVSDLSA RFGVSEVTIR SDLATLDQKQ LLVRSRGGAI
VNTELSRELS LKEKGSCYSA LKRELGAAAA SLVQNGDRLL LDSGTTTEQV AHHLMQHEDL
IVMTNGLNIA SVLSKSDSVE VMLTGGLLRK KSMSFYGSAA EKSLGDYNFN KLILGVDGFD
LKAGLTTHFE KEACLNRMMV DIATEVIVVT DSSKFDQQAF HVICPLLRIH RLVTDTGIPE
RYAQALEKQG VQLHLVERTQ
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