Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1183 |
Symbol | |
ID | 4603435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1446466 |
End bp | 1447398 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780530 |
Product | alpha/beta fold family hydrolase |
Protein accession | YP_927060 |
Protein GI | 119774320 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATC ATAAAATGCT GGATAGCCTG CTGCCTTTCA AACGCCGTTT TTTCAATCAC GGCGGCCATA ATATTCACTT TATCGATGAG GGACCAGAGG GCGACGTGGC ACCGAAAGGC ACTGTTGTTA TGGTGCACGG TAACCCGAGC TGGACCCTGT ATTACCGTAA TCTGATTCGC GCCCTGAAAG GCGAGTATCG CTGCATTGCC ATGGATAACG TAGGTTGCGG TTTGTCGGAT AAACCCGATG ACAGCCGTTA CCATTACACC CTGACAAGCC GGATAGGCGA TCTCGAAGCC TTGCTCGCTT CGCTCAATGT GACAGAAAAA GTCACCCTGG TGGTACACGA CTGGGGTGGC ATGATTGGCA TGGGCTGGGC GACCAAATAT CCAGATGCCA TTGAAAGACT GGTCATTTTG AACACAGCGG CATTCCACTT GCCTGCCACT AAACCCTTGC CATTGCGGCT TAAAATCTGC CGTGACACCT GGCTCGGTAC CTTGCTGGTG CGTGGCTTTA ATGCCTTTGC CGGTCTTGCC TCTGTGATTG GCTGCAAGCG CAATCCTATG AATGCAGAGA TGCGACGTGC CTACGTTGCC CCCTTTAACA GCTGGGCCAA TCGTATTTCT ACCCTGCGTT TTGTGCAGGA TATCCCCTTG AAGCCCGGCG ATACCGCCTG GGATGAAGTG AGCCGGATTG AGCAGAGTCT GGCGCAATTT ACCCGTGTGC CCACTCTCAT CTGCTGGGGA CTCAAAGACT TTGTGTTTGA CCGGCATTTC CTCACCGTAT GGCAAGAAAA GTTGCCCCAG GCCGAGGTGC ACGCCTTCGA AGACTGTGGT CACTACATCC TTGAGGATGC CAGCGACGAA GTGATAGCCC ACATTGAGCG TTTTGTGGCG GCCTCTGCGC CTGCCGAGGC CCTTGCGTCA TGA
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Protein sequence | MDNHKMLDSL LPFKRRFFNH GGHNIHFIDE GPEGDVAPKG TVVMVHGNPS WTLYYRNLIR ALKGEYRCIA MDNVGCGLSD KPDDSRYHYT LTSRIGDLEA LLASLNVTEK VTLVVHDWGG MIGMGWATKY PDAIERLVIL NTAAFHLPAT KPLPLRLKIC RDTWLGTLLV RGFNAFAGLA SVIGCKRNPM NAEMRRAYVA PFNSWANRIS TLRFVQDIPL KPGDTAWDEV SRIEQSLAQF TRVPTLICWG LKDFVFDRHF LTVWQEKLPQ AEVHAFEDCG HYILEDASDE VIAHIERFVA ASAPAEALAS
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