Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1166 |
Symbol | |
ID | 4603418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1421126 |
End bp | 1422385 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780513 |
Product | hypothetical protein |
Protein accession | YP_927043 |
Protein GI | 119774303 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATCC TGACCCTACC CCTGCTCCTG ACAAGCGTTT GCGGCCTGGC CCACGATATG GTGCCCGGCA CGGCGCAGCA GCAAGCCATA TTGTTTACCC ATGCCACAGT GCATACTGCC TCGAATGGGG TGCTTGAAAA CACCAACGTC TTGGTTGAGA ACGGCCGCAT CGCGGCCATG GGCGAGCAAA TTCAGGCTGC CAATGCCCGG GTGATAGACG CCACTGGCAA ACACCTCTAC CCCGGGCTGA TTGCTCTCGA TACCCAAGTG GGTATGGTAG AAATTGAGAT GGTGCGCCCC ACTGTGGACA CTCAGGATGT GGGCCTCAAC AATGCTGAAC TCAAGGCCTC ATCGGTGTTT AACCCTGACT CCGAGATTAT CCCGACCCTG CGCAAAAATG GCATCACACA CGCACAAATC GTGCCCCGTG GTGAACTGCT TGCCGGGCAA AGCGCGCTGG TGAATCTCGA CAGCTGGACA GTGGAAGATG CCCTGGTCGA CTCGCCCGCG GCACTGCACC TCTACTGGCC GGAGCTTGGC AATCTGCCGG TAAAAGATGA AGAGCGCAGC AAGGCACTCA CTGCCCACGG CGAAGCCCTG GCACAAATCG ATACGCTCTT TAGTGAGGCC AGTGCCTTTG TCCAGCGCAA AGCCGCAGAG CCCAGCCTTA CCCACAGGCG CTTTGAAGCC ATGGCACCGC TCTTTCGTGG TGACACAACC TTGTTCCTCC ATGCCAATAC CGCAGGTGCC ATCGGTGAAG TACTCACCTT TGTTAAAAAG TACCAACTCA AAGCCGTGTT GGTGGGTGGT TATGAAGCCT GGCACCATGG GGATGCTATC AAGGCCGCAG GCATTGCTGT GGTATACCCT TCGGTATTCA GCCTGCCCAG ATACCGGGAC GACAATATCG ACGAAGCCTT CAGTATTCCC GCCCGCCTGG CTGATGCAGG TATCGACTTT GCCATTGGCT ACAGCGGCGA TTGGGATGCA CGTAATCTGC CCTATGCCGC AGGATACGCC GCAGCCCATG GTTTAGGGAA AGAAGCGGCG CTCAAAGCGG TCACCCTCAA TGCCGCCCGT ATCCTTGGGG TGTCAGATAT GGGCGCTATC GAGGTGGGGT ACCGAGCCAA TCTGGTACTC TCTGGCGGGG ATATTCTCGA CCCTCTCAGC AGCCGTATCG AGCAGGTATT TATCGATGGC CGTGAGATAA CCCTGAAAAC CCGCGCCGAT CAGCTTTATC AAAAGTATCT GAAGCGATAG
|
Protein sequence | MRILTLPLLL TSVCGLAHDM VPGTAQQQAI LFTHATVHTA SNGVLENTNV LVENGRIAAM GEQIQAANAR VIDATGKHLY PGLIALDTQV GMVEIEMVRP TVDTQDVGLN NAELKASSVF NPDSEIIPTL RKNGITHAQI VPRGELLAGQ SALVNLDSWT VEDALVDSPA ALHLYWPELG NLPVKDEERS KALTAHGEAL AQIDTLFSEA SAFVQRKAAE PSLTHRRFEA MAPLFRGDTT LFLHANTAGA IGEVLTFVKK YQLKAVLVGG YEAWHHGDAI KAAGIAVVYP SVFSLPRYRD DNIDEAFSIP ARLADAGIDF AIGYSGDWDA RNLPYAAGYA AAHGLGKEAA LKAVTLNAAR ILGVSDMGAI EVGYRANLVL SGGDILDPLS SRIEQVFIDG REITLKTRAD QLYQKYLKR
|
| |