Gene Sama_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1165 
Symbol 
ID4603417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1420667 
End bp1421065 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content57% 
IMG OID639780512 
Productputative lipoprotein 
Protein accessionYP_927042 
Protein GI119774302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAC ACCCGTTGAA AGCCGCCGCA GCCATCGCGG TCGCCCTGTT AATGTCAGCC 
TGTACTTCTG ATTACCAGTT CTCCAGTAAC CTGGATCCCA AAGCATTCAA TGAGTATTTC
AAGGCCGGTG AGGTGACGCT CTTTGAAGGT GAAAACCAAC CCTCAGGACG CTATGAAATT
CTGGGTCTGG TGGATGGTGA AGCCTGTCAG GCCACGCCTC AGGACGTGCC CGCGACTATG
GCCGATGCCC GCACAGACGC CAGACGCAAG GCCGCGGATA AGGGTGCCAA CGGTCTAATC
ATCAAAAACT GTACCCTCAT CACCGAAGCA GCCGGTGGCT GCGAAACCCG CAGTCTGTGT
GTGGGACAGG CCATTCGTCA GGCAGTGCCC GCCAACTAA
 
Protein sequence
MTPHPLKAAA AIAVALLMSA CTSDYQFSSN LDPKAFNEYF KAGEVTLFEG ENQPSGRYEI 
LGLVDGEACQ ATPQDVPATM ADARTDARRK AADKGANGLI IKNCTLITEA AGGCETRSLC
VGQAIRQAVP AN