Gene Sama_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1156 
Symbol 
ID4603408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1409156 
End bp1410265 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content54% 
IMG OID639780503 
Productacetyltransferase 
Protein accessionYP_927033 
Protein GI119774293 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA CCATGGAATA TCGCCTCGCG AGCCTAGCCC AACTCGACGC CCTTAATGCC 
CTCGAAAACA GTGCTTTCGA GGGAGACCGC ATTTCGCCAA GACAAATGCG CAGGTTCATA
CAATCCCCCC ATGCCTGCCT GATGTTGGCA CTCGATGGCA GCACACTGGC GGCCTATGCA
CTGGTGCTTT TTCACCGTGG TACTCACCTT GCCCGGTTGT ATTCACTGGC AGTCAGCCCC
GATTATCGCG GCAGGGGGGT GTCGCGGGAA CTTCTGACCC GGGTCGAACA AGTCACGGTG
GAAAAAGGCT ATATCACCTT ACGCCTGGAG GTGCGAAATG ACAATCTGGC AGCCCGGAAT
CTGTATCAAA AAATGGGTTA TAAGGTACTG AAATCCTTAG TGCATTATTA TGACGATCTC
GCCGATGGCG TGAGAATGCA CAAGCGATTG GAGCCGCCCG GTCCAAGTAC TACCCTGCCC
ATGCCACTCT ACGTGCAAAC CACGCCATTC AGCTGCGGGC CGGCTTGTTT GCAAATGGCA
TTTGCGGCAC TGCGACGCTC ATTTCAGCCC AGCAGACTAT TGGAGCTGCA ACTGTGGCGT
GAGGCCACCA CTATCTACAT GACCAGCGGC CATGGGGGCT GCAGCGCCGA AGGGCTGGCA
TTGGCAGCGG TAAATCGGGG CTTTGACGTT ACCCTCTTCA GTCAGTCTCA TACCATTCCT
TTTATCGACA GTGTCAGGGA TGAGAACAAA AAAGCCATTA TCAGCCTGGT GCACGAGGAT
TTTGTTGGAC AGCTGGCCCA AAAAGGCGTG AGCGCCTTGC CACGGGCACC AACACTGGAA
GAGTTGGAGG GCTATTTACA ACGTGGGGCA GCAGTACTTC TGCTTATCAG TACCTACCGT
TTCAACGGTG AAAAGGGACC ACACTGGATT GCGCTCAGTG GCTGCAATCC TGAGTATTTT
TTCTTTCACG ACCCCTTTGT TGAACATCAA AAGGATGCGG TTTCCGCCGC TTATGTGCCG
GTTAGCCGGG CTGAGCTGGA GAAAGTGATG GGATTTGGGC GCAAAAAGCA AACCGCCTGC
GTGGTGCTTT ATCCGGAAAA CCATCACTGA
 
Protein sequence
MAITMEYRLA SLAQLDALNA LENSAFEGDR ISPRQMRRFI QSPHACLMLA LDGSTLAAYA 
LVLFHRGTHL ARLYSLAVSP DYRGRGVSRE LLTRVEQVTV EKGYITLRLE VRNDNLAARN
LYQKMGYKVL KSLVHYYDDL ADGVRMHKRL EPPGPSTTLP MPLYVQTTPF SCGPACLQMA
FAALRRSFQP SRLLELQLWR EATTIYMTSG HGGCSAEGLA LAAVNRGFDV TLFSQSHTIP
FIDSVRDENK KAIISLVHED FVGQLAQKGV SALPRAPTLE ELEGYLQRGA AVLLLISTYR
FNGEKGPHWI ALSGCNPEYF FFHDPFVEHQ KDAVSAAYVP VSRAELEKVM GFGRKKQTAC
VVLYPENHH