| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1140 |
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| Symbol | tsf |
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| ID | 4603392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1390156 |
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| End bp | 1391007 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780487 |
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| Product | elongation factor Ts |
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| Protein accession | YP_927017 |
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| Protein GI | 119774277 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0264] Translation elongation factor Ts |
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| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000133846 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.110772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTT CTGCTGCCCT GGTTAAAGAA CTGCGTGAGC GCACTGGCGC CGGCATGATG
GATTGTAAAA AGGCTCTGGA AGAGACTAAC GGTGATATCG AGCTTGCTAT CGATAACATG
CGTAAGAGTG GCGCTGCCAA AGCTGCCAAG AAAGCCGGTA ACATCGCTGC TGAAGGTACC
ATCCTGATCA AGCAAGGTGC TGGTTTCACT GCTCTGCTGG AAGTTAACTG CCAAACTGAC
TTCGTAGCCA AAGATTCTAA CTTCCTGGCT TTCGCTAACC AGGTTCTGGA AGTGGCTGCT
GCCGGTAAAG TATCCGTTGA AGACCTGAAA GCACAGTTTG AAGAAGCTCG TGTTGCTCTG
GTTGCCAAAA TCGGTGAAAA CATCAACGTA CGTCGCGTTG AGTACATCGA CGGTGAAAAC
GTGGCTGCTT ACCGCCACGG CGACCGTATC GGTGTAGTAG TTACCGGTAC CGCTGACGAA
GAAACTCTGA AGCACCTGGC CATGCACGTT GCTGCATCCA AGCCTGAGTA CGTAAATCCA
GAAGACGTAC CAGCTGAAGT GGTTGCCAAA GAGCGTGAAG TTCAGGTTGA AATCGCCATC
AACGAAGGCA AGCCAAAAGA AATCGCCGAG AAGATGGTTG AAGGCCGTAT GAAGAAGTTC
ACCGGTGAGG TTTCTCTGAC CGGTCAGCCA TTCATCATGG AGCCAAAGAA GACTGTTGGC
GAATTCCTGA AAGAGAAAGG CGCTACTGTT GCTAACTTCA TCCGCCTGGA AGTGGGTGAA
GGTATCGAGA AGAAAGAAGA AGATTTCGCG GCCGAAGTGG CCAAGCAAAT CGCTGCTTCT
CAAAAGGCCT AA
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| Protein sequence | MAISAALVKE LRERTGAGMM DCKKALEETN GDIELAIDNM RKSGAAKAAK KAGNIAAEGT
ILIKQGAGFT ALLEVNCQTD FVAKDSNFLA FANQVLEVAA AGKVSVEDLK AQFEEARVAL
VAKIGENINV RRVEYIDGEN VAAYRHGDRI GVVVTGTADE ETLKHLAMHV AASKPEYVNP
EDVPAEVVAK EREVQVEIAI NEGKPKEIAE KMVEGRMKKF TGEVSLTGQP FIMEPKKTVG
EFLKEKGATV ANFIRLEVGE GIEKKEEDFA AEVAKQIAAS QKA
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