Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1138 |
Symbol | |
ID | 4603390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1388187 |
End bp | 1388987 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639780485 |
Product | methionine aminopeptidase |
Protein accession | YP_927015 |
Protein GI | 119774275 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000518116 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.111417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAG TCATCAAGAC CGCCGATGAG ATAGAAAAAA TGCGCGCCGC AGGTAAGCTG GCCGCAGATG TTCTTGAAAT GATTGCGCCC TTTGTCAAGG CTGGCGTGAC CACCAATGAA CTCAACGATA TTTGCGCCAA ATACACCGAA GAACAGGGTG CCATTTCTGC GCCGCTCAAC TACCACGGCT TTCCCAAGTC TATCTGTACT TCGGTCAATG AAGTTATCTG CCACGGCATC CCCTCAGATC AGCCACTGAA AGACGGCGAT ATCCTCAATA TCGATATTAC AGTCATCAAA GACGGTTACC ACGGTGATAC GTCCAAGATG TTTTTCATCG GTGAAGTATC TCCAAAAGAC AAGCGCCTGT GCCGAATCGC ACAGGAGAGC CTGTACGCAG CCATTCGCAA GGTTCGTCCC GGCATGAAGC TGGGTGAAAT CGGCGCCACC ATTGAAAAAG TGGTCAAGGG AGCCAAGACC GGCCTTGAGA AATACAGCAT TGTCCGTGAC TACTGCGGCC ACGGCATTGG TGCCACTTTC CACGAAGAGC CTCAGGTCGT GCACTACAAA AACACCGACA ACACGGTTCT TCGCCCCGGC ATGTGCTTTA CCATTGAACC GATGATCAAC GCGGGTCGTC ACCAGACTGT GCTCGACAAA GACGATGGCT GGACTGTGAC CACCATCGAT GGCAAAAACT CTGCCCAGTA CGAACACACT CTCTTGGTAA CCGAGACGGG TGTGGAAGTA CTCACCCTGC GCAGCGAAGA AGATTTCCCA CGCATAATCA ATCACAAATA A
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Protein sequence | MSIVIKTADE IEKMRAAGKL AADVLEMIAP FVKAGVTTNE LNDICAKYTE EQGAISAPLN YHGFPKSICT SVNEVICHGI PSDQPLKDGD ILNIDITVIK DGYHGDTSKM FFIGEVSPKD KRLCRIAQES LYAAIRKVRP GMKLGEIGAT IEKVVKGAKT GLEKYSIVRD YCGHGIGATF HEEPQVVHYK NTDNTVLRPG MCFTIEPMIN AGRHQTVLDK DDGWTVTTID GKNSAQYEHT LLVTETGVEV LTLRSEEDFP RIINHK
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