| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1137 |
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| Symbol | |
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| ID | 4603389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1385608 |
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| End bp | 1388178 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780484 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_927014 |
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| Protein GI | 119774274 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0729778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.136181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGG CTCAGCAGGC CAAAGCCTCT TTGCAGGCGC TGAATCAGGA ACTGGCGCTG
GCCTTCGCGG CCCGTGAAGA TGTTGTCGAA CTGGTCAGGC GCCGCTGCCG GGTCGTCGAT
GAATTACTCC AAACCGCCTG GAGCCAACAT GGTCTGGGCA ATTACCCCAT CGCCCTGGTT
GCGGTGGGGG GGTATGGTCG TGGTGAGCTG CATCCCCACT CAGACATAGA TCTGTTGATG
TTAGTGGATG AAAAGCTCCC CAAAGAAGCC GAGTTTGTGC TCGGCTACTT TATTGCCTTC
TTGTGGGACG CGGGCCTCGA GATTGGCCAC AGCGTTCGCA CCATTAAAGA TACCCTTACC
CTCGGCCGGG ACGATATCAC CATCGCCACC AACTTGTTGG AGGCACGCTT TCTCACCGGC
ACAGAGCCCC TGTTTGATGA GCTTTACGAT GCCATCCGCA CCCAGGATTT TTGGCCATCC
AGCGACTTTT TTGTGGCCAA GCGGGATGAG CAGCAGGCCC GGCACACCAA GGCCAGCGCA
TTCGATTTAG AGCCCAACGT CAAGAGTTGC CCGGGTGGCC TTCGCGATAT CCAAACCGTG
GCCTGGGTCG CCATGCGTCA CTTCAACGCC TCGCGTCTGG AGGAGTTGGT CGGACATGGT
TTCCTTGAGC CCATAGAGCT TGAGGAGTTA CTCGAGTGTC AGCAGTTTTT GTGGCAAATC
CGCTTTGCCC TGCACATTGC CTCTGGACGT GACGAAAACC GCCTGCTCTT CGACCTGCAG
CGCCAGGTCG CAGAACTTTT GGGATACGAA GACAAGACCC AGCTTGCCGT CGAACAGATG
ATGAAGCTCT ACTACCGCAC CGTTCGGCGG GTAATGGAGC TCAATGAAAT GCTGCTGCAG
CTTTTCAAAC GCGCAACATT GGGCCACACC AAGGCATTGG AAATCGTCCC GATAAACGAC
AACTTTCAAC GTCGTGGCAG CTTTATAGAG GCCCTCTCGG CCAATCCGTT TGTGAAGCCG
GAAGACATCA TGGGGCTGTT TCTGCTGATA GCCCGCAACT CCAATATCCG CGGTATCTAC
GCCCCTACCC TGCGCTCCAT GCGCCAGGCC CGAAAAGCGC TCACCCAACC ACTGATGGAA
TACGCAGAAT GCCGTCAGGT ATTCATGGAA ATCCTGCGCC ATCCACGGGG TATTTCGGCG
TTTTCCCTGA TGCACAAGCA CGGCATTCTG TCTGCCTATT TGCCCGCCTG GCGCGCCATT
GAAGGCCAGA TGCAGTTCGA TCTCTTTCAC GCCTATACAG TGGATGAACA CACCCACAGG
CTGTTGCTCA ATATCGAGCG CTTTTCGCAG CCTGAGCAAA AAGATGAGTT CCCCTTGGGG
TCTGTGCTGA TTAATCAGCT ACCGAAAAAG GGGCTGCTGG TACTCGCGGC CATCTTCCAT
GACATTGCCA AGGGCCGTGG TGGCGATCAC AGTAAACTCG GCGCCGTGGA TGCGCTGGCG
TTTTGTAAGT CCCATGGCCT GAACGATCAT GACGGCCGCT TGGTGAGCTG GCTGGTTGAA
AACCATCTGA TGATGTCGGT AACAGCCCAA AGGCGGGATA TTTCTGACCC CGATGTGGTA
GCGGATTTTG CCGGTAAGGT GCGCGATGCG GTGCACTTGA GCTATCTCTA CTGCCTGACG
GTGGCTGATA TCTGCGCCAC CAACGAAAAA ACCTGGAACA ACTGGAAGGG CTCACTACTG
AGGGATCTGT ACTTTTCAAC CCAAAGGGTT CTGGCACGGG GCAAAGAAAA ACCGGTAGAT
ATCCGCGCCC GGGTACGGGA ATACCAGGCC AAGGCGAAAA AGGAGCTGCT ACGTCGCGGC
GTGAAGGAAA AAGAACTTGA TGCCCTGTGG GCCAGGTTCA AAGCCGATTA CTTTTTGCGC
CATCAACCCA ATCAAATCGC CTGGCATGCT GAGGGCATCC TTAAACACCG CCAGGATGAG
CCGCTGGTGC TGATCTCTAA ACACACAACC CGTGGCGGCA CCGAGCTATT TGTTTACTGC
CGCGACAAGC CCAAGCTGTT CGCCACCGTG ATGGCGGTAT TGGACAACAA AAACATCAAT
GTCCACGATG CGACTGTAAT GACCTCCAAG GATAACTATG CCCTGGACAG CTTTGTGATT
CTTGAGCAGG ATGGCGAACC CCTGATGCAG CTGTCGCGTA TCCAGAGCAT TCGCAAGGGG
CTTGAAAAGG CACTTGCCAG TGAAAACCCC AGACCGACAA AGTTCCGTAA GCTTTCCCGC
AAGATGAAAC CTTTTAACGT ACCAACACAG GTCAGTTTTC TGCCGGGTAG CCGTCATGGT
ACAAGTATGA TGGAACTTAT CGCTCTGGAT ATGCCCGGTC TGCTCGCAAG AGTGGGTGAC
ATCTTCTATC GCTGTGAGAT AACCTTGCTG GCAGCAAAAA TCACCACTAT CGGTGAGCGG
GCTGAAGACT TTTTCGTACT GCAAACCAAT GACGGTCAAG CCCTCAGTGA CGAGGAACAG
CGACGGCTTA AAGAGGCACT GGTCAGTGCC CTGTCCCAGA CAATTTTTTA A
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| Protein sequence | MTTAQQAKAS LQALNQELAL AFAAREDVVE LVRRRCRVVD ELLQTAWSQH GLGNYPIALV
AVGGYGRGEL HPHSDIDLLM LVDEKLPKEA EFVLGYFIAF LWDAGLEIGH SVRTIKDTLT
LGRDDITIAT NLLEARFLTG TEPLFDELYD AIRTQDFWPS SDFFVAKRDE QQARHTKASA
FDLEPNVKSC PGGLRDIQTV AWVAMRHFNA SRLEELVGHG FLEPIELEEL LECQQFLWQI
RFALHIASGR DENRLLFDLQ RQVAELLGYE DKTQLAVEQM MKLYYRTVRR VMELNEMLLQ
LFKRATLGHT KALEIVPIND NFQRRGSFIE ALSANPFVKP EDIMGLFLLI ARNSNIRGIY
APTLRSMRQA RKALTQPLME YAECRQVFME ILRHPRGISA FSLMHKHGIL SAYLPAWRAI
EGQMQFDLFH AYTVDEHTHR LLLNIERFSQ PEQKDEFPLG SVLINQLPKK GLLVLAAIFH
DIAKGRGGDH SKLGAVDALA FCKSHGLNDH DGRLVSWLVE NHLMMSVTAQ RRDISDPDVV
ADFAGKVRDA VHLSYLYCLT VADICATNEK TWNNWKGSLL RDLYFSTQRV LARGKEKPVD
IRARVREYQA KAKKELLRRG VKEKELDALW ARFKADYFLR HQPNQIAWHA EGILKHRQDE
PLVLISKHTT RGGTELFVYC RDKPKLFATV MAVLDNKNIN VHDATVMTSK DNYALDSFVI
LEQDGEPLMQ LSRIQSIRKG LEKALASENP RPTKFRKLSR KMKPFNVPTQ VSFLPGSRHG
TSMMELIALD MPGLLARVGD IFYRCEITLL AAKITTIGER AEDFFVLQTN DGQALSDEEQ
RRLKEALVSA LSQTIF
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