Gene Sama_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1126 
Symbol 
ID4603378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1375311 
End bp1375952 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content50% 
IMG OID639780473 
Productacetyltransferase 
Protein accessionYP_927003 
Protein GI119774263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACACC AAACTAAGGA AAGGTTTCGC GCTGTTTATC TCACCGCTGA AGATTTGAGG 
GTTGCCGCTT CAATTCTGTA TAACGCGTAC CATGATGACC CGTTTTTCAT GCAAACCCTT
GGGTACGAAG ACAAGGTCTC TTACGAGCAA AAACTCCGGG CCGCCATTCG CGAAGAGCTC
AACGAATTGT GGCAACAGGA GCAAACCCTG GTGGGTTGGT TCGATGAAGA ACGCCTGATA
GGCATTGCCT GCGTGGTCAG CCAACATGCG CCCTTGGGGG AAGCTAAAAA TTGGCATTGG
CGCCTGAAAA TGTTGCTGGG TACAGGGTGG CAGTCTACCC AGATGATGTT GAAGAAAGAG
GCCCAAATTT TGGAACACCT GCCCGGTAAG GCCTGTGGCA TTTTGCAATT TATTGCGCTG
GCGCCAACTG AGCAGGGTAA GGGGCATGGT CAACAACTGC TTAAAGCGGT GCAGTCATGG
TGTGACGATC AGCCTGAGTT GGATGGCATA GGGGTATTTG TCAGCCATCC GTTGCATAAG
CACCTTTTCC AATCCAATGG TTTTGAAAGC CTAGGCCCCA TCCACTTTGA TAAAGTTGAA
GGTGAGCTGA TGTTTTATCG CAGGCCATCC AATGAAGCCT GA
 
Protein sequence
MEHQTKERFR AVYLTAEDLR VAASILYNAY HDDPFFMQTL GYEDKVSYEQ KLRAAIREEL 
NELWQQEQTL VGWFDEERLI GIACVVSQHA PLGEAKNWHW RLKMLLGTGW QSTQMMLKKE
AQILEHLPGK ACGILQFIAL APTEQGKGHG QQLLKAVQSW CDDQPELDGI GVFVSHPLHK
HLFQSNGFES LGPIHFDKVE GELMFYRRPS NEA