| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1072 |
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| Symbol | rdgC |
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| ID | 4603324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1298478 |
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| End bp | 1299389 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780419 |
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| Product | recombination associated protein |
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| Protein accession | YP_926949 |
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| Protein GI | 162139900 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.21617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.467123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTTA AAAATCTCAC CCTGTATCGC TTCAACAAGC CTGTCACCAT AGACGCAGAT
TCACTGGAAA AGGCCCTGGC CGATTTCTCC TTCAGCCCTT GTTCCAGCCA GGACGTCAGT
AAGTTCGGGT TTTCAAAGGC GCTTGGTAAA CACGGCAGCG CACTGGTGCA CAGCGCCAAC
AACCGCCATT TGATCTGCGC CACCAAGGAA GAAAAAATTC TGCCCGGCCA GGTCATTAAA
GAAGCGCTGG AAGAAAAGGT GGGACAGCTT GAAGATGAAG AAAACCGCAA GCTGACCAAG
AAAGAAAAAG ATGCGTTAAA AGACGAAATC ACCACCAGCT TGCTGCCACG GGCGTTTTCC
CGTCGCAGTC AGATCCATGC TCTGATTTTG CCTGAAATTG ATATGATCCT GGTGGACAGC
TCCAGCGCCA CCAAGGCCGA AGAGCTGCTG GCGTTGCTGC GTAAAGCCAT GGGCTCATTG
CCTGTGATAC CTGTGTCTTT CAATGTCCCG GTTGAGCACA CTATGACCGA ATGGCTCAAG
GCTGGTGAAG CCAGTGCGCC CTTTATCATG CAGGATGAGG CAGAGCTTAA ATCGGCCGCC
GAAGAAGGCG GTATTGTGCG CTTCAAGCAG CAGGTTCTCA CCGAAGACGA AGTGCTGGCC
CATCTGGAAA CCGGCAAAGA AGTACACAAG CTGGCGCTGC ATTTTGGTCA GTCCATCGCG
CTCCTGCTCC AGTCCGATGC CAGTCTCAAA CGCCTCAAAT TCTCTGAGGA ATTCCGTGCA
GGCAATGACG ATTTGGGCAA CGATGACCCC ATGGCCCGCC TCGATGCCGA TTTTGCCCTC
ATGGGCAGCG AGTTGGTCGC CCTGATGCAC GCACTGGTCG AGGCACTGGG CGGACTGCCC
AAAGACGAGT AA
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| Protein sequence | MWFKNLTLYR FNKPVTIDAD SLEKALADFS FSPCSSQDVS KFGFSKALGK HGSALVHSAN
NRHLICATKE EKILPGQVIK EALEEKVGQL EDEENRKLTK KEKDALKDEI TTSLLPRAFS
RRSQIHALIL PEIDMILVDS SSATKAEELL ALLRKAMGSL PVIPVSFNVP VEHTMTEWLK
AGEASAPFIM QDEAELKSAA EEGGIVRFKQ QVLTEDEVLA HLETGKEVHK LALHFGQSIA
LLLQSDASLK RLKFSEEFRA GNDDLGNDDP MARLDADFAL MGSELVALMH ALVEALGGLP
KDE
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