Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1057 |
Symbol | |
ID | 4603309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1278505 |
End bp | 1281342 |
Gene Length | 2838 bp |
Protein Length | 945 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780404 |
Product | M16 family peptidase |
Protein accession | YP_926934 |
Protein GI | 119774194 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.867585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT GGATTCTGGC TGCCGCCATT TCGGCAGCAC TCGCGGGCTG CGCCCAGCAC TCTTCTGACT CTCTGGCACT GCCGGAAGGG GTCACCCTGG TTGAGATTGT TGCCGCAGAC AGTGCTGGCG TTGGTATTCC TTACAAGAAG TTCCAGTTGG CCAATGGTCT GACAGTGATA CTGCACCAGG ACAGCTCAGA TCCTCTGGTG CACGTCGATG TGACCTATCA CGTGGGCTCG GGCCGGGAGT TGCCCGGTCG CAGCGGTTTT GCTCACCTGT TTGAACATAT GATGTTCCAG GGCTCAGAAA ACGTCGCCGA TGAGCAGCAC TTTAAGGTGG TCACAGAGTC CGGCGGTACC CTGAACGGCA CCACGAACAC CGACCGCACC AATTATTTTG AGACAGTGCC CAGTAACCAG CTGGAAAAAA TGCTGTGGCT CGAGTCTGAC CGCATGGGCT TTTTCTTGCC TGCGCTTACC GAAGAAAAAT TTGAGGTTCA GCGCGAAACC GTGAAAAACG AGCGTGCCCA GCGTATCGAT AACCAGCCCT ATGGCCGTAT GTACGAGCGC TTCAGCCAGG CCATGTATCC CGCCGGTCAT CCATACTCCT GGCCTGTGAT TGGCTGGCCG GAGGATTTGA ACCGTGCCGA GCTTGCGGAT GTGAAGCAAT TCTTCCAGCG CTGGTATGGT CCCAACAATG CCACCCTGAC CATTGGTGGC GATTTTGACG AGCTGCAGAC TCTGGCCTGG GTGAACAAGT ATTTTGGTGA TATTCCGCGC GGTCCGGAAG TTGAGGCACT GCCCAAAAAC CAGGTAACCC TGGATAAGGA CAGATACCTG TCCATGGAAG ACAAGGTACA CCTGCCGCTC ATCCGTATGG CGCTGCCCAC TGTGTATGCC AGCCATCAGG ATGAAGCCGC ACTGGATTTA CTCGCCAACA TTCTTGGCGG TGGCAAAACG TCGCTGGTGT ACAAAAACCT GGTCAAGGAA GGCTATGCGG TGCAGGCCAG CGCCAGCCAC CCTTGCCGCG AGCTGTCCTG TGAGATGTCG TTTTTTGCCC TGGCCAATCC CGCCAAGGGC GGCAGTCTCA AAGAGCTTGA AGGCAAAGTT CGTGCGTCCA TTGCCGAGTT TGAGCGCCGT GGCGTAACCG ATGAAGATCT GGAAAAGGTG AAGGTGCAAT TTGAGGCCGA TACCATCTTT GGTCTGCAGA GCGTTCGCGG CAAGGTATCC GCGCTGGCCG CCAACGAGAC CTTCTATGGC AACCCCAATA TGATTGCCAA AGATTTGCAG CGCTATGCCA GTGTGACCAA AGCCGATGTT ATTCGCGTAT TCAATCAATA CGTGAAAGAC AAGCCCATGG TCATCATGAG CGTGGTGCCT GAAGGTGCCA AAGCTCTGGT GGCAGCGGCC GACAACTTTA CTGCTCCGGC GCCGCTGTTA GCTGCCAACG CGGTTGCCGG TGAGCTGAAA GTCAGTGAGG CCAAGTCGTC CTTTGACCGC AGTGTTATGC CACAAAGTGG TAAAGCACCG GTACTTAAAG TGCCTACTCT GTGGCGCGAC ACCTTGGGCA ATGGAATTGC CGTGCTCGGT ACCCAGAGTG CCGAAACCCC CACCACGGAA ATCGTAATTT ACCTGGCTGG CGGCCATCGC CTGGCCGACG TCAGCAAGGC CGGTGTGGCT CAGCTCACCG CCGCTATGCT CAATGAGTCA ACCAGCCAAC GCTCCAGTGA GGAACTGACC CAGGCCCTCG AACTCCTGGG GGCCTCGGTG CAGTTTTCTG CCAGCGATTA TCAGAGTGAA ATCAAGCTGT CAGCACTGAC AGAAAAGCTG GATGACACTC TCGCCGTGCT GAAAGAAAAG CTGCTGATGC CGGGCTTCAA GGCGGAAGAC TTCGAGCGGG TGAAACAGCA AACCCTGCAG GGGCTTAAAC ATTCTCAGTC CAACCCCAAC TATCTGGCAA GCACAGGTTT TGCCAAGCTG CTGTACGGCG ATAACAATGC CCTGGGCGTG GATGCAACTG GTACCGTAGA CACTGTTGCC GCCCTGACGC TGGACGACAT CAAGGCTTTC TACCAGACAC AGTACAAGGC CGGTAATGCC CAGATGGTGG CGGTATCCAG CGCGCCTAAA GCGGCACTGC TCTCTTCGCT CAAGACACTC GACAGCTGGC AAGGTGAAGC CACCGCCATG CCTGCGCTTG GACAACTGCC AGGCTTAAGC GGTGGCACCA TTTATGTGCT GGACAAACCC GCCGCGGCCC AGTCGGTAAT TTCCATTGGT AAGCTTGCGC TGCCTTTTGA TGCCATCGGT GAGTACTTTA AAGCCGGTTT GATGAACTAC CCGCTGGGCG GCGCTTTCAA CAGCCGTATT AACCTGAATC TGCGTGAAGA TAAGGGTTAC ACCTACGGCG CCCGCAGTCG TTTCAGCGGC GGCAGCGAAG TGGGTCAGTT CCTGGCGACT GCCAGTGTGC GCAGCGATGT GACGGCAGCT GCGGTATCTG AGTTCATCAA AGAAATCACC ACCTATAACG CCACCGGTAT CCGTGACGAT GAGCTGAACT TCATGCGCAA CTCCATCTCC CAGGGCCAGG CACTGGATTA TGAAACCCCA TACCAGAAAG CCGGCTTTAT GCGGATGATC CAGCGTTATA ATCTCAATGA TCGCTTTACC GCCGAGCAGG ATAAAATTAT CGCGGGTATT CAAAAAGATG AAATCGACGC TCTTGCCAAG AAACATCTGA ATATCAATGA GATGGTTATC TTTGTGGTGG GTGATAAGGC CAGCATATTG CCTGAACTCG AGGCGCTCGG GTATCCGGTG AAAGACTTGG TATTGTAA
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Protein sequence | MKKWILAAAI SAALAGCAQH SSDSLALPEG VTLVEIVAAD SAGVGIPYKK FQLANGLTVI LHQDSSDPLV HVDVTYHVGS GRELPGRSGF AHLFEHMMFQ GSENVADEQH FKVVTESGGT LNGTTNTDRT NYFETVPSNQ LEKMLWLESD RMGFFLPALT EEKFEVQRET VKNERAQRID NQPYGRMYER FSQAMYPAGH PYSWPVIGWP EDLNRAELAD VKQFFQRWYG PNNATLTIGG DFDELQTLAW VNKYFGDIPR GPEVEALPKN QVTLDKDRYL SMEDKVHLPL IRMALPTVYA SHQDEAALDL LANILGGGKT SLVYKNLVKE GYAVQASASH PCRELSCEMS FFALANPAKG GSLKELEGKV RASIAEFERR GVTDEDLEKV KVQFEADTIF GLQSVRGKVS ALAANETFYG NPNMIAKDLQ RYASVTKADV IRVFNQYVKD KPMVIMSVVP EGAKALVAAA DNFTAPAPLL AANAVAGELK VSEAKSSFDR SVMPQSGKAP VLKVPTLWRD TLGNGIAVLG TQSAETPTTE IVIYLAGGHR LADVSKAGVA QLTAAMLNES TSQRSSEELT QALELLGASV QFSASDYQSE IKLSALTEKL DDTLAVLKEK LLMPGFKAED FERVKQQTLQ GLKHSQSNPN YLASTGFAKL LYGDNNALGV DATGTVDTVA ALTLDDIKAF YQTQYKAGNA QMVAVSSAPK AALLSSLKTL DSWQGEATAM PALGQLPGLS GGTIYVLDKP AAAQSVISIG KLALPFDAIG EYFKAGLMNY PLGGAFNSRI NLNLREDKGY TYGARSRFSG GSEVGQFLAT ASVRSDVTAA AVSEFIKEIT TYNATGIRDD ELNFMRNSIS QGQALDYETP YQKAGFMRMI QRYNLNDRFT AEQDKIIAGI QKDEIDALAK KHLNINEMVI FVVGDKASIL PELEALGYPV KDLVL
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